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13_2_20cm_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_71_1
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(3..482)
DNA (480bp) protein (160aa)
Integrase, catalytic region n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZLK3_ACICS
transposase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
integrase catalytic subunit
13_2_20cm_scaffold_71_2
unknown

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comp(839..1063)
DNA (225bp) protein (75aa)

This feature has no annotations

13_2_20cm_scaffold_71_3
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1139..1576
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6K5X9_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST26796.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
NHL repeat-containing protein
13_2_20cm_scaffold_71_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1762..2133
DNA (372bp) protein (124aa)
NHL repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJK2_KORVE
NHL repeat-containing protein
NHL repeat protein {ECO:0000313|EMBL:ABF42948.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_2_20cm_scaffold_71_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2311..3036
DNA (726bp) protein (242aa)
transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037BF0E0
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABF43054.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
13_2_20cm_scaffold_71_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3068..4834
DNA (1767bp) protein (589aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ95_KORVE
sensor signal transduction histidine kinase
13_2_20cm_scaffold_71_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4939..5703)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUC7_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39523.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_71_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5703..7301)
DNA (1599bp) protein (533aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUC6_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39524.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_71_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7387..9633)
DNA (2247bp) protein (749aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Periplasmic sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUC5_KORVE
periplasmic sensor hybrid histidine kinase
13_2_20cm_scaffold_71_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(10203..10934)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YC0_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_scaffold_71_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10885..11583)
DNA (699bp) protein (233aa)
Death-on-curing family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSS5_PARL1
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:ABS62958.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavam
13_2_20cm_scaffold_71_12
unknown

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comp(11651..11818)
DNA (168bp) protein (56aa)

This feature has no annotations

13_2_20cm_scaffold_71_13
unknown

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comp(11913..12062)
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_71_14
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12233..12814
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y865_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR02748.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
13_2_20cm_scaffold_71_15
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

12792..13490
DNA (699bp) protein (233aa)
Transcriptional regulator, LuxR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TC7_SOLUE
LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_2_20cm_scaffold_71_16
unknown

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13539..13841
DNA (303bp) protein (101aa)

This feature has no annotations

13_2_20cm_scaffold_71_17
unknown

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comp(14120..14425)
DNA (306bp) protein (102aa)

This feature has no annotations

13_2_20cm_scaffold_71_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

14629..15663
DNA (1035bp) protein (345aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QAP2_9DELT
13_2_20cm_scaffold_71_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15654..18299
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NYC0_GRAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_71_20
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18621..21188
DNA (2568bp) protein (856aa)
Glycosyl transferase, family 2 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP64_SYNFM
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABK19216.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source=
13_2_20cm_scaffold_71_21
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

21179..22957
DNA (1779bp) protein (593aa)
ABC transporter related protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWP5_9CYAN
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AFY86414.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_2_20cm_scaffold_71_22
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

22970..23836
DNA (867bp) protein (289aa)
RimK-like ATP-grasp domain protein id=4677481 bin=GWA2_Elusimicrobia_56_46 species=Propionibacterium propionicum genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
RimK-like ATP-grasp domain protein Tax=GWC2_Elusimicrobia_56_31_curated
RimK-like ATP-grasp domain protein
13_2_20cm_scaffold_71_23
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23829..24839
DNA (1011bp) protein (337aa)
Tax=RBG_16_Deltaproteobacteria_50_11_curated
13_2_20cm_scaffold_71_24
unknown

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24836..25900
DNA (1065bp) protein (355aa)

This feature has no annotations

13_2_20cm_scaffold_71_25
unknown

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25867..26892
DNA (1026bp) protein (342aa)

This feature has no annotations

13_2_20cm_scaffold_71_26
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26902..28056
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIA6_SINAD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_2_20cm_scaffold_71_27
unknown

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28043..28183
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_scaffold_71_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(28426..29136)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A9_GEODF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_71_29
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(29224..32022)
DNA (2799bp) protein (933aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A653B rbh
ATP-dependent DNA ligase {ECO:0000313|EMBL:GAL84184.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;
DNA ligase D
13_2_20cm_scaffold_71_30

Not on your lists

32084..32554
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK91469.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying items 1-30 of 45 in total

View Taxonomy