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13_2_20cm_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_75_1
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(391..792)
DNA (402bp) protein (134aa)
3,4-dihydroxyphenylalanine extradiol dioxygenase family protein YgiD n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHK9_GEOBB
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AJE03978.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
13_2_20cm_scaffold_75_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..1129)
DNA (327bp) protein (109aa)
3,4-dihydroxyphenylalanine extradiol dioxygenase family protein YgiD n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHK9_GEOBB
LigB family aromatic ring-opening extradiol dioxygenase
3,4-dihydroxyphenylalanine extradiol dioxygenase family protein YgiD {ECO:0000313|EMBL:ACH38219.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacterac
13_2_20cm_scaffold_75_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1378..2811
DNA (1434bp) protein (478aa)
tRNA(Ile)-lysidine synthetase-like; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
tRNA(Ile)-lysidine synthetase-like protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] id=24440111 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tRNA(Ile)-lysidine synthetase
13_2_20cm_scaffold_75_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

3225..5168
DNA (1944bp) protein (648aa)
FtsH peptidase; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN1_KORVE
FtsH peptidase
13_2_20cm_scaffold_75_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5306..5815
DNA (510bp) protein (170aa)
Putative kinase n=1 Tax=Rhizobium sp. CF142 RepID=J1TAH1_9RHIZ
Putative kinase {ECO:0000313|EMBL:EJJ28756.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
hypothetical protein
13_2_20cm_scaffold_75_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

5825..6130
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPL7_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_2_20cm_scaffold_75_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6588..7400
DNA (813bp) protein (271aa)
folP; dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dihydropteroate synthase (EC:2.5.1.15)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI000346A61F
13_2_20cm_scaffold_75_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7612..9288
DNA (1677bp) protein (559aa)
peptidase, m28d (aminopeptidase es-62) subfamily (EC:3.4.-.-)
Peptidase M28 family protein {ECO:0000313|EMBL:EAU63242.1}; Peptidase, M28D (Aminopeptidase ES-62) subfamily {ECO:0000313|EMBL:ADO69102.1}; EC=3.4.-.- {ECO:0000313|EMBL:ADO69102.1};; TaxID=378806 spec
Peptidase M28 family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RW8_STIAD rbh
13_2_20cm_scaffold_75_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9317..10906)
DNA (1590bp) protein (530aa)
Amine oxidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS77_KORVE
amine oxidase
Amine oxidase {ECO:0000313|EMBL:ABF40273.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_2_20cm_scaffold_75_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10908..12518)
DNA (1611bp) protein (537aa)
FAD dependent oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS78_KORVE
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABF40272.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
13_2_20cm_scaffold_75_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13088..16162
DNA (3075bp) protein (1025aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU99_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_75_12
unknown

Not on your lists

16795..16956
DNA (162bp) protein (54aa)

This feature has no annotations

13_2_20cm_scaffold_75_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17119..20088
DNA (2970bp) protein (990aa)
Protein translocase subunit SecA n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=SECA_SOLUE rbh
protein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
13_2_20cm_scaffold_75_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20159..21001
DNA (843bp) protein (281aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILK1_KORVE
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABF42249.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_2_20cm_scaffold_75_15
unknown

Not on your lists

21051..21395
DNA (345bp) protein (115aa)

This feature has no annotations

13_2_20cm_scaffold_75_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21517..22095
DNA (579bp) protein (193aa)
yrdA; putative transferase id=12555887 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
carbonic anhydrase
13_2_20cm_scaffold_75_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


22092..23405
DNA (1314bp) protein (438aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rul
Histidine--tRNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=SYH_SOLUE
13_2_20cm_scaffold_75_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


23472..25265
DNA (1794bp) protein (598aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TH88_CALNY
13_2_20cm_scaffold_75_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

25509..27485
DNA (1977bp) protein (659aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000362050F
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA mismatch repair protein MutL
13_2_20cm_scaffold_75_20

Not on your lists

27630..28394
DNA (765bp) protein (255aa)
Enoyl-acyl carrier protein reductase {ECO:0000313|EMBL:CBI08085.1}; EC=1.3.1.9 {ECO:0000313|EMBL:CBI08085.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" sour
fabI; enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-acyl carrier protein reductase n=1 Tax=mine drainage metagenome RepID=E6QLG5_9ZZZZ
13_2_20cm_scaffold_75_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28432..29154
DNA (723bp) protein (241aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM8_KORVE
cytidylate kinase
13_2_20cm_scaffold_75_22
unknown

Not on your lists

29306..29809
DNA (504bp) protein (168aa)

This feature has no annotations

13_2_20cm_scaffold_75_23
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(30340..31599)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=240015 specie
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F rbh
rho; transcription termination factor Rho
13_2_20cm_scaffold_75_24
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(31841..34210)
DNA (2370bp) protein (790aa)
Lon-A peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Lon protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRE0_KORVE
Lon-A peptidase
13_2_20cm_scaffold_75_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(34334..35584)
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026Q3_SOLUE
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
clpX; ATP-dependent protease ATP-binding subunit ClpX
13_2_20cm_scaffold_75_26
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(35747..36367)
DNA (621bp) protein (207aa)
ATP-dependent Clp protease proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CLPP_KORVE
ATP-dependent Clp protease proteolytic subunit
13_2_20cm_scaffold_75_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(36401..37693)
DNA (1293bp) protein (431aa)
Trigger factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TIG_KORVE
trigger factor; K03545 trigger factor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
trigger factor
13_2_20cm_scaffold_75_28
unknown

Not on your lists

37954..38598
DNA (645bp) protein (215aa)

This feature has no annotations

13_2_20cm_scaffold_75_29
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(38595..39725)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E6B1C
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABQ89388.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseifle
13_2_20cm_scaffold_75_30
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39949..41691
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000378BCE6 rbh
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:BAL23049.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
Displaying items 1-30 of 67 in total

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