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13_2_20cm_scaffold_28_12

Organism: 13_2_20CM_Acidobacteria_58_27

near complete RP 48 / 55 BSCG 47 / 51 ASCG 14 / 38 MC: 1
Location: comp(14929..15867)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRT9_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 311.0
  • Bit_score: 142
  • Evalue 6.50e-31
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 311.0
  • Bit_score: 142
  • Evalue 1.80e-31
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS18021.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 311.0
  • Bit_score: 142
  • Evalue 9.10e-31

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGATGTCCATCAACTTGAACTCTTCCTCGCGGTGATGGACTCACCCAGCATGACGCGGGCAGCGGAGAAAGTTCACTTATCTCCGGGCGCCGTAAGTCTCCAGCTTCACAACCTCGCCGAAGAGCTCCACACCGAGCTTTTCGTGCGCCGGGGAAAGCACCTGATTCCCACGCCCGCCGCTTCGCGCCTCGCGGAACGTGCCAGGGAACTCGTCAGGCTGATGGGCCACATCCAGCAGGAATTTCAGAATGACATCACCAAGGACACGCGTCCTTTTCATTTCGCGACCGGCGTCACCACGCTCATCTACCAACTCGGCCGGCCTCTCCGGCAATTGCGCAGCCGGTTCCCTCATGCCGAGATCCGCGTTACCGTCGGGGTAACGGAAGAGATGGTTGCCGGTTTGCACGAACGGCGGTTTGACCTGGCGCTTATTACGCTGCCCGTCCCGGAAGACAATCTCCAGATCATTCCCCTGTTCGACGAGGAGCTGCTCGTCGTGCGCCCATCGCTCAAGAAAACCGCCAGCAGCCATATCGGCACACTGCGGCCCGCCGAGCTCATGAATGTGCCGTTTCTACTTTATCCCAAACGAAGCAATGTGCGGCGTGCCATCGATGGAATCTTCAAGGAAATCGGCGTACAGCCAAACGTTCGCATGGAAGCGGACGACACGGAAGCCATCAAACGGCTCGTGGAGTCCGGCTTCGGCTATTCCATCCTCCCGGAACATGCCTTGCGGGGCCGGTCGCATTTCTTTCAAAAGTTTCGGGTCGAAGGCCATCGGCTCACAAGAAACCTGGCGCTGGCGATGGCTGCGACCGAGAGTCCGCGCAAGCTAACCGAGGCCATCGCCAACTTTCTCCGGGAGGTGCTTACGGAGCAAGAGCGAAGCTCCCGTCCGCAGGTCCTGCCGAAAGCCGCGGGCAAAAGTTAG
PROTEIN sequence
Length: 313
MDVHQLELFLAVMDSPSMTRAAEKVHLSPGAVSLQLHNLAEELHTELFVRRGKHLIPTPAASRLAERARELVRLMGHIQQEFQNDITKDTRPFHFATGVTTLIYQLGRPLRQLRSRFPHAEIRVTVGVTEEMVAGLHERRFDLALITLPVPEDNLQIIPLFDEELLVVRPSLKKTASSHIGTLRPAELMNVPFLLYPKRSNVRRAIDGIFKEIGVQPNVRMEADDTEAIKRLVESGFGYSILPEHALRGRSHFFQKFRVEGHRLTRNLALAMAATESPRKLTEAIANFLREVLTEQERSSRPQVLPKAAGKS*