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13_2_20cm_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_28_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

13_2_20cm_scaffold_28_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(176..1420)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A2703 rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87974.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_2_20cm_scaffold_28_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1458..2411)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003748997
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG93156.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_28_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2458..3339)
DNA (882bp) protein (294aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ0_KORVE rbh
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ABF43310.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_2_20cm_scaffold_28_5

Not on your lists

comp(3336..4310)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036DF2C6 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
xylose isomerase
13_2_20cm_scaffold_28_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4384..7935)
DNA (3552bp) protein (1184aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037460AC rbh
CnaB domain-containing protein
Cna B domain protein {ECO:0000313|EMBL:ABJ88839.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="So
13_2_20cm_scaffold_28_7
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8500..9570
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EA0E0
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RBG_16_Ignavibacteria_36_9_curated
LacI family transcriptional regulator
13_2_20cm_scaffold_28_8

Not on your lists

comp(9613..10638)
DNA (1026bp) protein (342aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCB2_PEDSD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48721.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase domain-containing protein
13_2_20cm_scaffold_28_9
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10660..11733)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQW0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON76399.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
13_2_20cm_scaffold_28_10
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11745..13127)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DF2DC
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADV83509.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain AT
13_2_20cm_scaffold_28_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13594..14898
DNA (1305bp) protein (435aa)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376D0A6 rbh
hypothetical protein
13_2_20cm_scaffold_28_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14929..15867)
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRT9_VARPS
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS18021.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
13_2_20cm_scaffold_28_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16103..17773
DNA (1671bp) protein (557aa)
Altronate dehydratase {ECO:0000313|EMBL:CDM65034.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CDM65034.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
D-galactarate dehydratase/altronate hydrolase family protein, insertion n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5U9_ACIC5
D-galactarate dehydratase/altronate hydrolase family protein, insertion
13_2_20cm_scaffold_28_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17842..18714
DNA (873bp) protein (291aa)
amidohydrolase n=1 Tax=Rudanella lutea RepID=UPI00037D8C32 rbh
Predicted TIM-barrel fold metal-dependent hydrolase, COG3618 {ECO:0000313|EMBL:CDM65040.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
amidohydrolase 2
13_2_20cm_scaffold_28_15
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18698..19480
DNA (783bp) protein (261aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5V1_ACIC5
Short chain dehydrogenase {ECO:0000313|EMBL:AHM59457.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovir
short chain dehydrogenase
13_2_20cm_scaffold_28_16
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19571..20896
DNA (1326bp) protein (442aa)
L-fucose transporter n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVM0_EMTOG rbh
L-fucose transporter
L-fucose transporter {ECO:0000313|EMBL:AFK03723.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotroph
13_2_20cm_scaffold_28_17
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20901..21239
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A6F4C
Uncharacterized protein {ECO:0000313|EMBL:KGL62180.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
13_2_20cm_scaffold_28_18

Not on your lists

21359..22567
DNA (1209bp) protein (403aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK6_RHOMR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_28_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22596..24020
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVZ6_SORCE
Sugar phosphate permease {ECO:0000313|EMBL:CDM66676.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_2_20cm_scaffold_28_20

Not on your lists

24061..25155
DNA (1095bp) protein (365aa)
gck1; Gck (EC:2.7.1.45)
PfkB domain protein n=1 Tax=uncultured bacterium 293 RepID=E3T630_9BACT
PfkB domain protein {ECO:0000313|EMBL:ADC35773.1}; TaxID=698389 species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;"
13_2_20cm_scaffold_28_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25189..25872
DNA (684bp) protein (228aa)
KdgA1 protein {ECO:0000313|EMBL:CAN91396.1}; EC=4.1.3.16 {ECO:0000313|EMBL:CAN91396.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
KdgA1 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F631_SORC5
kdgA1; hypothetical protein
13_2_20cm_scaffold_28_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25911..26687)
DNA (777bp) protein (259aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPI7_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:CDM66675.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
2-deoxy-D-gluconate 3-dehydrogenase
13_2_20cm_scaffold_28_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

26915..27829
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VQ4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_28_24
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27859..28233)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5V9_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO31834.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_2_20cm_scaffold_28_25
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28236..28700)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5W0_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO31405.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_2_20cm_scaffold_28_26
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28820..30001
DNA (1182bp) protein (394aa)
glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, group 2 family {ECO:0000313|EMBL:ACO31903.1}; EC=2.4.1.- {ECO:0000313|EMBL:ACO31903.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acido
Glycosyl transferase, group 2 family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F415_ACIC5
13_2_20cm_scaffold_28_27
unknown

Not on your lists

30036..30239
DNA (204bp) protein (68aa)

This feature has no annotations

13_2_20cm_scaffold_28_28
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(30245..31483)
DNA (1239bp) protein (413aa)
UDP-sulfoquinovose synthase (EC:3.13.1.1)
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:AFZ37873.1}; EC=3.13.1.1 {ECO:0000313|EMBL:AFZ37873.1};; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cya
UDP-sulfoquinovose synthase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XZC2_STAC7 rbh
13_2_20cm_scaffold_28_29
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(31698..33413)
DNA (1716bp) protein (572aa)
Glycosyl transferase, family 39 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Z45_SOLUE rbh
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
glycosyl transferase family protein
13_2_20cm_scaffold_28_30
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(33473..35398)
DNA (1926bp) protein (642aa)
asnB1; asparagine synthase (EC:6.3.5.4)
Asparagine synthase {ECO:0000313|EMBL:ACO33771.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ACO33771.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" sour
Asparagine synthetase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F418_ACIC5 rbh
Displaying items 1-30 of 42 in total

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