name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_2_20cm_scaffold_110_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..153
----------------- DNA (153bp) protein (51aa) |
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
13_2_20cm_scaffold_110_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
508..1476
----------------- DNA (969bp) protein (323aa) |
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14628122 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
|
|
13_2_20cm_scaffold_110_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
1568..2545
----------------- DNA (978bp) protein (326aa) |
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14626716 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
|
|
13_2_20cm_scaffold_110_4
unknown
|
Not on your lists |
comp(2580..3002)
----------------- DNA (423bp) protein (141aa) |
This feature has no annotations |
|
13_2_20cm_scaffold_110_5
unknown
|
Not on your lists |
3545..4165
----------------- DNA (621bp) protein (207aa) |
This feature has no annotations |
|
13_2_20cm_scaffold_110_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(4072..4953)
----------------- DNA (882bp) protein (294aa) |
Uncharacterized conserved protein id=3830375 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
|
|
13_2_20cm_scaffold_110_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
5007..6008
----------------- DNA (1002bp) protein (334aa) |
aminocarboxymuconate-semialdehyde decarboxylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative TIM-barrel fold metal-dependent hydrolase id=3830378 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
aminocarboxymuconate-semialdehyde decarboxylase
|
|
13_2_20cm_scaffold_110_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
6017..6871
----------------- DNA (855bp) protein (285aa) |
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=4547724 bin=GWF2_Methylomirabilis_70_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter membrane protein 1, HAAT family
|
|
13_2_20cm_scaffold_110_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
6868..7836
----------------- DNA (969bp) protein (323aa) |
amino acid ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type transporter, integral membrane subunit id=4827658 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
amino acid ABC transporter
|
|
13_2_20cm_scaffold_110_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
7821..9062
----------------- DNA (1242bp) protein (414aa) |
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
Extracellular ligand-binding receptor
|
|
13_2_20cm_scaffold_110_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
9067..9822
----------------- DNA (756bp) protein (252aa) |
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease protein id=3033655 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
|
|
13_2_20cm_scaffold_110_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
9822..10517
----------------- DNA (696bp) protein (232aa) |
ABC transporter related id=4827655 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein Tax=GWA2_Rokubacteria_73_35_curated
putative ABC transporter
|
|
13_2_20cm_scaffold_110_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
10517..11578
----------------- DNA (1062bp) protein (354aa) |
luciferase-like monooxygenase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288D90A
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like monooxygenase
|
|
13_2_20cm_scaffold_110_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria
|
Not on your lists |
11575..12093
----------------- DNA (519bp) protein (173aa) |
hypothetical protein n=1 Tax=Gordonia polyisoprenivorans RepID=UPI00037ACFED
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
hypothetical protein
|
|
13_2_20cm_scaffold_110_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(12050..12925)
----------------- DNA (876bp) protein (292aa) |
Tartronate semialdehyde reductase id=4547685 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxy-3-oxopropionate reductase Tax=GWA2_Rokubacteria_70_23_curated
6-phosphogluconate dehydrogenase protein
|
|
13_2_20cm_scaffold_110_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(12941..13567)
----------------- DNA (627bp) protein (209aa) |
Isochorismatase hydrolase id=4827652 bin=GWA2_Methylomirabilis_73_35 species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
isochorismatase hydrolase Tax=GWA2_Rokubacteria_73_35_curated
isochorismatase hydrolase
|
|
13_2_20cm_scaffold_110_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
13624..15012
----------------- DNA (1389bp) protein (463aa) |
UbiD family decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
|
|
13_2_20cm_scaffold_110_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15009..15677
----------------- DNA (669bp) protein (223aa) |
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627784 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_2_20cm_scaffold_110_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15685..16182
----------------- DNA (498bp) protein (166aa) |
id=4885132 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
|
|
13_2_20cm_scaffold_110_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(16201..19107)
----------------- DNA (2907bp) protein (969aa) |
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glr3436 protein id=3830908 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
glpC; D-lactate dehydrogenase (cytochrome)
|
|
13_2_20cm_scaffold_110_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19127..19669
----------------- DNA (543bp) protein (181aa) |
Thiol-disulfide isomerase and thioredoxins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiol-disulfide isomerase and thioredoxins id=3830905 bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase
|
|
13_2_20cm_scaffold_110_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(19683..20708)
----------------- DNA (1026bp) protein (342aa) |
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] id=14627250 bin=bin7_NC10_sister species=Shinella zoogloeoides genus=Shinella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ROK family protein
|
|
13_2_20cm_scaffold_110_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(20713..21456)
----------------- DNA (744bp) protein (248aa) |
YdjC-like protein id=3269465 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
YdjC-like protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
|
|
13_2_20cm_scaffold_110_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(21467..22183)
----------------- DNA (717bp) protein (239aa) |
Methylase id=3269468 bin=GWA2_Methylomirabilis_73_35 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
methyltransferase Tax=GWA2_Rokubacteria_73_35_curated
methyltransferase-like protein
|
|
13_2_20cm_scaffold_110_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(22173..22484)
----------------- DNA (312bp) protein (104aa) |
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=3269471 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_2_20cm_scaffold_110_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(22612..22731)
----------------- DNA (120bp) protein (40aa) |
id=14627246 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=14627246 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
|
|
13_2_20cm_scaffold_110_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(22757..24478)
----------------- DNA (1722bp) protein (574aa) |
ggt; gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase id=3269474 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_2_20cm_scaffold_110_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(24497..24994)
----------------- DNA (498bp) protein (166aa) |
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3269477 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_2_20cm_scaffold_110_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(24991..27600)
----------------- DNA (2610bp) protein (870aa) |
helicase Tax=GWC2_Rokubacteria_70_16_curated
Putative helicase id=3914659 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rbh
helicase
|
|
13_2_20cm_scaffold_110_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27748..28578
----------------- DNA (831bp) protein (277aa) |
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003774BBE
Phytanoyl-CoA dioxygenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
phytanoyl-coA dioxygenase
|