name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_2_20cm_scaffold_1222_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
2..184
----------------- DNA (183bp) protein (61aa) |
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] id=14625564 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hyuA; hydantoin utilization N-methylhydantoinase (EC:3.5.2.14)
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13_2_20cm_scaffold_1222_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
181..1812
----------------- DNA (1632bp) protein (544aa) |
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14625563 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
rbh
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
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13_2_20cm_scaffold_1222_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(1918..2856)
----------------- DNA (939bp) protein (313aa) |
id=4814771 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4814771 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
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13_2_20cm_scaffold_1222_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(2965..4314)
----------------- DNA (1350bp) protein (450aa) |
pilR2; nitrogen regulation protein NR(I); K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4814770 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
zraR; transcriptional regulatory protein ZraR
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13_2_20cm_scaffold_1222_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
4438..4767
----------------- DNA (330bp) protein (110aa) |
Thioredoxin id=4814769 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trxA; thioredoxin 1, redox factor Tax=GWC2_Rokubacteria_70_16_curated
trxA; thioredoxin 1, redox factor
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13_2_20cm_scaffold_1222_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
4870..6321
----------------- DNA (1452bp) protein (484aa) |
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] id=14625549 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
trpE; anthranilate synthase, component I (EC:4.1.3.27)
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13_2_20cm_scaffold_1222_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
6318..6890
----------------- DNA (573bp) protein (191aa) |
trpG; anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glutamine amidotransferase of anthranilate synthase id=3775487 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
anthranilate synthetase component II
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13_2_20cm_scaffold_1222_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
6887..7903
----------------- DNA (1017bp) protein (339aa) |
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase id=1724736 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_2_20cm_scaffold_1222_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
7900..9177
----------------- DNA (1278bp) protein (426aa) |
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3775494 bin=GWF2_Methylomirabilis_70_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
hypothetical protein
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13_2_20cm_scaffold_1222_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
9177..10367
----------------- DNA (1191bp) protein (397aa) |
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3775497 bin=GWF2_Methylomirabilis_70_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_2_20cm_scaffold_1222_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
10352..11023
----------------- DNA (672bp) protein (224aa) |
dienelactone hydrolase-like enzyme (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Dienelactone hydrolase-like enzyme id=1724740 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Dienelactone hydrolase family
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13_2_20cm_scaffold_1222_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(11046..11519)
----------------- DNA (474bp) protein (158aa) |
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L17 id=1724741 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplQ; 50S ribosomal protein L17
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13_2_20cm_scaffold_1222_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(11516..12499)
----------------- DNA (984bp) protein (328aa) |
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=4666368 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_2_20cm_scaffold_1222_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(12519..13142)
----------------- DNA (624bp) protein (208aa) |
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
30S ribosomal protein S4 id=4666314 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S4
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13_2_20cm_scaffold_1222_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(13152..13559)
----------------- DNA (408bp) protein (136aa) |
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
30S ribosomal protein S11 id=4666313 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S11
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13_2_20cm_scaffold_1222_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13563..13982)
----------------- DNA (420bp) protein (140aa) |
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S13 id=4666312 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S13
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13_2_20cm_scaffold_1222_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(14043..14156)
----------------- DNA (114bp) protein (38aa) |
hypothetical protein; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L36 id=4666311 bin=GWA2_Methylomirabilis_73_35 species=Propionibacterium freudenreichii genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_2_20cm_scaffold_1222_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
comp(14204..14422)
----------------- DNA (219bp) protein (73aa) |
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=14625536 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
infA; translation initiation factor IF-1
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13_2_20cm_scaffold_1222_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(14419..15168)
----------------- DNA (750bp) protein (250aa) |
map; methionine aminopeptidase (EC:3.4.11.18) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=14625535 bin=bin7_NC10_sister species=Orenia marismortui genus=Orenia taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methionine aminopeptidase (EC:3.4.11.18)
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13_2_20cm_scaffold_1222_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(15165..15743)
----------------- DNA (579bp) protein (193aa) |
adenylate kinase family protein (EC:2.7.4.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] id=14625534 bin=bin7_NC10_sister species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate kinase
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13_2_20cm_scaffold_1222_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(15744..17018)
----------------- DNA (1275bp) protein (425aa) |
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein translocase subunit SecY id=4716762 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secY; preprotein translocase subunit SecY
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13_2_20cm_scaffold_1222_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(17015..17482)
----------------- DNA (468bp) protein (156aa) |
50S ribosomal protein L15 id=4666306 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=GWA2_Rokubacteria_73_35_curated
50S ribosomal protein L15
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13_2_20cm_scaffold_1222_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(17472..17660)
----------------- DNA (189bp) protein (63aa) |
50S ribosomal protein L30 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L30 id=4666305 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmD; 50S ribosomal protein L30
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13_2_20cm_scaffold_1222_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(17641..18177)
----------------- DNA (537bp) protein (179aa) |
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
30S ribosomal protein S5 id=4666304 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsE; 30S ribosomal protein S5
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13_2_20cm_scaffold_1222_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(18194..18559)
----------------- DNA (366bp) protein (122aa) |
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L18 id=4799428 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplR; 50S ribosomal protein L18
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13_2_20cm_scaffold_1222_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(18556..19104)
----------------- DNA (549bp) protein (183aa) |
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L6 id=4666302 bin=GWA2_Methylomirabilis_73_35 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplF; 50S ribosomal protein L6
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13_2_20cm_scaffold_1222_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(19115..19510)
----------------- DNA (396bp) protein (132aa) |
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S8 id=4716768 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
30S ribosomal protein S8
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13_2_20cm_scaffold_1222_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(19515..19700)
----------------- DNA (186bp) protein (62aa) |
50S ribosomal protein L5 id=4666301 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsZ; 30S ribosomal protein S14 Tax=GWA2_Rokubacteria_73_35_curated
rpsZ; 30S ribosomal protein S14
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13_2_20cm_scaffold_1222_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(19708..20415)
----------------- DNA (708bp) protein (236aa) |
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L5 id=4799432 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplE; 50S ribosomal protein L5
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13_2_20cm_scaffold_1222_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(20421..20750)
----------------- DNA (330bp) protein (110aa) |
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L24 id=4666300 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L24
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