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13_2_20cm_scaffold_879

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_879_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..418
DNA (417bp) protein (139aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=GWA2_Rokubacteria_73_35_curated
Methionine synthase (B12-independent) id=1866156 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
vitamin-B12 independent methionine synthase
13_2_20cm_scaffold_879_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

415..1149
DNA (735bp) protein (245aa)
conserved hypothetical protein; putative signal peptide Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=1866153 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
conserved protein of unknown function
13_2_20cm_scaffold_879_3
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

1197..1979
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BA46E
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_2_20cm_scaffold_879_4
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

2008..2343
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVZ8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW36000.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
13_2_20cm_scaffold_879_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2344..3141
DNA (798bp) protein (266aa)
hpd; 4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] Tax=GWA2_Rokubacteria_73_35_curated
UPI0002971993 related cluster id=1866141 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hpd; 4-hydroxyphenylpyruvate dioxygenase
13_2_20cm_scaffold_879_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3142..4671
DNA (1530bp) protein (510aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative fatty-acid--CoA ligase (EC:6.2.1.-)
AMP-dependent synthetase and ligase id=4143225 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_879_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4750..5958)
DNA (1209bp) protein (403aa)
Putative acyl-CoA dehydrogenase id=3814357 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
putative acyl-CoA dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
putative acyl-CoA dehydrogenase
13_2_20cm_scaffold_879_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

6349..8253
DNA (1905bp) protein (635aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE87_SINAD
asparagine synthase, glutamine-hydrolyzing Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
asparagine synthase
13_2_20cm_scaffold_879_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8244..9608
DNA (1365bp) protein (455aa)
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Dolichyl-phosphate-mannose-protein mannosyltransferase id=2315328 bin=GWA2_Methylomirabilis_73_35 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
13_2_20cm_scaffold_879_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9626..10777
DNA (1152bp) protein (384aa)
Nitrate reductase (NADH) {ECO:0000313|EMBL:EEF59049.1}; EC=1.7.1.1 {ECO:0000313|EMBL:EEF59049.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobi
Nitrate reductase (NADH) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM56_9BACT
putative sulfite oxidase protein
13_2_20cm_scaffold_879_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10780..11640)
DNA (861bp) protein (287aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=2592715 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NUDIX hydrolase
13_2_20cm_scaffold_879_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11657..12796)
DNA (1140bp) protein (380aa)
alkanal monooxygenase id=14627403 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alkanal monooxygenase Tax=CSP1_6_Rokubacteria
alkanal monooxygenase
13_2_20cm_scaffold_879_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12858..14318
DNA (1461bp) protein (487aa)
aminopeptidase P (EC:3.4.11.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aminopeptidase P (EC:3.4.11.9)
Peptidase M24 id=2937755 bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_879_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14343..14819
DNA (477bp) protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein id=14430577 bin=bin3_NC10 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_879_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14844..15359)
DNA (516bp) protein (172aa)
ferripyochelin binding protein (fbp) id=14627404 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferripyochelin binding protein (fbp) Tax=CSP1_6_Rokubacteria
ferripyochelin binding protein (fbp)
13_2_20cm_scaffold_879_16
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(15356..15760)
DNA (405bp) protein (135aa)
alpha/beta hydrolase (EC:3.3.2.-)
Alpha/beta hydrolase fold n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W2P8_METEP
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
13_2_20cm_scaffold_879_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16247..17290
DNA (1044bp) protein (348aa)
aminoglycoside phosphotransferase; K06979 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminoglycoside phosphotransferase
13_2_20cm_scaffold_879_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17324..18511)
DNA (1188bp) protein (396aa)
putative acyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
fada7; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase id=4599720 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_879_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18538..18885)
DNA (348bp) protein (116aa)
putative Endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
COG0251: Putative translation initiation inhibitor, yjgF family id=2937744 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_879_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19004..19432
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626169 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_879_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19436..19963
DNA (528bp) protein (176aa)
metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_879_22
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20025..21311
DNA (1287bp) protein (429aa)
Beta-lactamase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UMI2_METS4
Beta-lactamase {ECO:0000313|EMBL:KJB93805.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KAC
beta-lactamase
13_2_20cm_scaffold_879_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21338..22006)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B54EA1
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_879_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22060..23073)
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase id=3732189 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
alcohol dehydrogenase
13_2_20cm_scaffold_879_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23111..23383)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_879_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23427..24308)
DNA (882bp) protein (294aa)
ABC transporter ATP-binding protein/permease (EC:3.6.1.3)
ABC transporter related n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TD56_9BRAD
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_879_27
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24302..25126)
DNA (825bp) protein (275aa)
ABC transporter related protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3D0_POLGS
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADZ70955.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC
Displaying 27 items

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