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13_2_20cm_scaffold_15364

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_15364_1
unknown

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1..231
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_15364_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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235..531
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL23_KORVE
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_scaffold_15364_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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577..1395
DNA (819bp) protein (273aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=14625516 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rplB; 50S ribosomal protein L2
13_2_20cm_scaffold_15364_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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1720..2064
DNA (345bp) protein (115aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=24537570 bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rpsS; 30S ribosomal protein S19
13_2_20cm_scaffold_15364_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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2068..2577
DNA (510bp) protein (170aa)
50S ribosomal protein L22 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V805_TERSS
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Acidobacteria_68_9_curated
50S ribosomal protein L22
13_2_20cm_scaffold_15364_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


2596..3273
DNA (678bp) protein (226aa)
30S ribosomal protein S3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS3_KORVE
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S3
13_2_20cm_scaffold_15364_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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3316..3732
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B58DAB
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rplP; 50S ribosomal protein L16
13_2_20cm_scaffold_15364_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3735..3944
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=1 Tax=Facklamia ignava CCUG 37419 RepID=K1LNR3_9LACT
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="
13_2_20cm_scaffold_15364_9
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3944..4237
DNA (294bp) protein (98aa)
30S ribosomal protein S17 n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZL07_TERRK
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 1
13_2_20cm_scaffold_15364_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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4259..4627
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL14_SOLUE
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplN; 50S ribosomal protein L14
13_2_20cm_scaffold_15364_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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4959..5516
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F66F6
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
rplE; 50S ribosomal protein L5
13_2_20cm_scaffold_15364_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5517..5636
DNA (120bp) protein (40aa)
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" so
13_2_20cm_scaffold_15364_13
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5644..6042
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E56F9
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain A
13_2_20cm_scaffold_15364_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6074..6622
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL6_ACIC5
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (str
13_2_20cm_scaffold_15364_15
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6660..7040
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL18_CARHZ
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carbox
13_2_20cm_scaffold_15364_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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7078..7620
DNA (543bp) protein (181aa)
30S ribosomal protein S5 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7K1_TERSS
30S ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
30S ribosomal protein S5
13_2_20cm_scaffold_15364_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


7620..7874
DNA (255bp) protein (85aa)
50S ribosomal protein L30 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC6_9CHLR
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L30
13_2_20cm_scaffold_15364_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


7879..8412
DNA (534bp) protein (178aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=12555560 bin=CNBR_ACIDO species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L15
13_2_20cm_scaffold_15364_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


8462..9667
DNA (1206bp) protein (402aa)
Protein translocase subunit SecY n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISA2_KORVE
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit secY/sec61 alpha
Displaying 19 items

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