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13_2_20cm_scaffold_278

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_278_1
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..903)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4A7B9
integrase
Integrase family protein {ECO:0000313|EMBL:ADW69546.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATC
13_2_20cm_scaffold_278_2
unknown

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comp(1478..1603)
DNA (126bp) protein (42aa)

This feature has no annotations

13_2_20cm_scaffold_278_3
unknown

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comp(1829..2410)
DNA (582bp) protein (194aa)

This feature has no annotations

13_2_20cm_scaffold_278_4
unknown

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comp(2598..2939)
DNA (342bp) protein (114aa)

This feature has no annotations

13_2_20cm_scaffold_278_5
unknown

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3065..3388
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_scaffold_278_6
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(3251..3958)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B71292
hypothetical protein id=12555246 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_scaffold_278_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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4592..4858
DNA (267bp) protein (89aa)
Putative transposase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YR41_9SPHN
transposase IS3/IS911 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
IS3 family transposase orfA
13_2_20cm_scaffold_278_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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4882..5802
DNA (921bp) protein (307aa)
integrase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B79ECB
IS3 family transposase orfB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
IS3 family transposase orfB
13_2_20cm_scaffold_278_9
unknown

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5748..6080
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_scaffold_278_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(6188..8941)
DNA (2754bp) protein (918aa)
Cna B domain-containing protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBR9_9BACT
CnaB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_scaffold_278_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(8938..10746)
DNA (1809bp) protein (603aa)
ABC transporter related n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CW5_SOLUE
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ81101.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_278_12
Actinopolymorpha alba, Actinopolymorpha, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(10736..12193)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037AB1AE
protein kinase-like protein
13_2_20cm_scaffold_278_13
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12215..13249)
DNA (1035bp) protein (345aa)
Aminoglycoside phosphotransferase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XQW5_STAC7
phosphotransferase
Uncharacterized protein {ECO:0000313|EMBL:ACB52150.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
13_2_20cm_scaffold_278_14
unknown

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comp(13289..14302)
DNA (1014bp) protein (338aa)

This feature has no annotations

13_2_20cm_scaffold_278_15
unknown

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comp(14320..15330)
DNA (1011bp) protein (337aa)

This feature has no annotations

13_2_20cm_scaffold_278_16
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15327..16334)
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX18774.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361
13_2_20cm_scaffold_278_17
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16331..17563)
DNA (1233bp) protein (411aa)
Glycosyl transferase group 1 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENI2_ACIF5 rbh
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACH83016.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source=
13_2_20cm_scaffold_278_18
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(17547..18755)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003640750
Putative glycosyl transferase {ECO:0000313|EMBL:ELS03718.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
hypothetical protein
13_2_20cm_scaffold_278_19

Not on your lists

comp(18752..19177)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL61667.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative Transcription termination/antitermination factor NusG id=4775526 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transcription termination/antitermination factor NusG
Displaying 19 items

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