ggKbase home page

13_2_20cm_scaffold_2613

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2613_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2..718)
DNA (717bp) protein (239aa)
ABC transporter, ATPase subunit; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ABC transporter n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378FB2C
ABC transporter-like protein
13_2_20cm_scaffold_2613_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(893..3100)
DNA (2208bp) protein (736aa)
OstA-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR39_KORVE
OstA-like protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
OstA-like protein
13_2_20cm_scaffold_2613_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(3179..4297)
DNA (1119bp) protein (373aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKE0_KORVE
diguanylate cyclase with GAF sensor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
GAF sensor-containing diguanylate cyclase
13_2_20cm_scaffold_2613_4
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4770..5507
DNA (738bp) protein (246aa)
Transcriptional regulator, putative n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9P3_AMMDK
transcriptional regulator
Transcriptional regulator, putative {ECO:0000313|EMBL:ACX53022.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;"
13_2_20cm_scaffold_2613_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5512..6366
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAL2_MYXSD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_scaffold_2613_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6482..7039
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000362E4F8
sseA; Rhodanese-related sulfurtransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
sseA; Rhodanese-related sulfurtransferase
13_2_20cm_scaffold_2613_7

Not on your lists

comp(7070..8851)
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003691FC2
Amidase {ECO:0000313|EMBL:CBI00041.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
amidase
13_2_20cm_scaffold_2613_8

Not on your lists

9020..9565
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000369A91E
Uncharacterized protein {ECO:0000313|EMBL:CBI07950.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_2613_9
unknown

Not on your lists

comp(9673..9996)
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_scaffold_2613_10
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

10291..10722
DNA (432bp) protein (144aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
putative integral membrane protein id=5045771 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
13_2_20cm_scaffold_2613_11
unknown

Not on your lists

10805..11002
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_2613_12
unknown

Not on your lists

11042..11563
DNA (522bp) protein (174aa)

This feature has no annotations

13_2_20cm_scaffold_2613_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11731..12993
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B92_SOLUE
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ81674.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_2_20cm_scaffold_2613_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13047..13460
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029F8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82328.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_2613_15
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13532..14545
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037459EC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW70826.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
13_2_20cm_scaffold_2613_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14564..15049)
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus S
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003730D0A
phosphodiesterase
13_2_20cm_scaffold_2613_17
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15133..15468
DNA (336bp) protein (112aa)
PadR family transcripitonal regulator n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036050DE
PadR family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADV83317.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanen
13_2_20cm_scaffold_2613_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15479..16543
DNA (1065bp) protein (355aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS63_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
efflux ABC transporter inner membrane protein
13_2_20cm_scaffold_2613_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16581..17315
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CC200
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84756.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
Displaying 19 items

View Taxonomy