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13_2_20cm_scaffold_2618

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2618_1
unknown

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comp(203..1468)
DNA (1266bp) protein (422aa)

This feature has no annotations

13_2_20cm_scaffold_2618_2

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comp(1471..1800)
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL21887.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_2618_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2011..3723)
DNA (1713bp) protein (571aa)
Amidohydrolase 3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ7_KORVE
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABF40443.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_2_20cm_scaffold_2618_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(3720..5030)
DNA (1311bp) protein (437aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ6_KORVE
peptidase M20 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase M20
13_2_20cm_scaffold_2618_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5027..6262)
DNA (1236bp) protein (412aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_2_20cm_scaffold_2618_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6295..6537)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QW1_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_2618_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6549..7280)
DNA (732bp) protein (244aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ5_KORVE
succinate-semialdehyde dehydrogenase (NAD(P)+)
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_2_20cm_scaffold_2618_8
unknown

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7593..8141
DNA (549bp) protein (183aa)

This feature has no annotations

13_2_20cm_scaffold_2618_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8229..9011)
DNA (783bp) protein (261aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] id=17110420 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
truA; tRNA pseudouridine synthase A
13_2_20cm_scaffold_2618_10
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9086..9703)
DNA (618bp) protein (206aa)
Orotate phosphoribosyltransferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF12_9FIRM
Orotate phosphoribosyltransferase Tax=S_Thermoanaerobacterales_50_218
orotate phosphoribosyltransferase
13_2_20cm_scaffold_2618_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

10006..12021
DNA (2016bp) protein (672aa)
Outer membrane efflux protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WL6_SOLUE
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
outer membrane efflux protein
13_2_20cm_scaffold_2618_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12219..13937
DNA (1719bp) protein (573aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ABF40456.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABF40456.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
Methylmalonyl-CoA mutase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRP4_KORVE
methylmalonyl-CoA mutase
13_2_20cm_scaffold_2618_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13954..14256
DNA (303bp) protein (101aa)
Methylmalonyl-CoA mutase family protein {ECO:0000313|EMBL:CDM64417.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CDM64417.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomon
Methylmalonyl-CoA mutase domain-containing protein n=4 Tax=Thermoanaerobacter RepID=G2MXS9_9THEO
methylmalonyl-CoA mutase domain-containing protein
13_2_20cm_scaffold_2618_14
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(14294..15367)
DNA (1074bp) protein (358aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00036E867D
ribosome-associated GTPase
Displaying 14 items

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