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13_2_20cm_scaffold_5230

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5230_1
unknown

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comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

13_2_20cm_scaffold_5230_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(424..2472)
DNA (2049bp) protein (683aa)
Putative secreted protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVI1_ACISM rbh
secreted protein
Putative secreted protein {ECO:0000313|EMBL:ADW68429.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tu
13_2_20cm_scaffold_5230_3
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2469..2903)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVI2_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68430.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
13_2_20cm_scaffold_5230_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3810..5354
DNA (1545bp) protein (515aa)
Transcriptional regulator, GntR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CB3_SOLUE
GntR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
GntR family transcriptional regulator
13_2_20cm_scaffold_5230_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5425..6345
DNA (921bp) protein (307aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
pyridoxal biosynthesis lyase pdxS n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C54FF rbh
pyridoxal biosynthesis lyase PdxS
13_2_20cm_scaffold_5230_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6392..6991
DNA (600bp) protein (200aa)
glutamine amidotransferase subunit PdxT; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003802850
glutamine amidotransferase subunit PdxT
13_2_20cm_scaffold_5230_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7087..7461
DNA (375bp) protein (125aa)
protein tyrosine phosphatase Tax=RBG_16_Desulfobacca_60_12_curated
13_2_20cm_scaffold_5230_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7470..8138
DNA (669bp) protein (223aa)
DtxR family iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Iron dependent regulatory protein id=1250746 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
dtxR; iron dependent regulatory protein
13_2_20cm_scaffold_5230_9
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8406..8753)
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=4445160 bin=GWF2_Melioribacter_38_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_2_20cm_scaffold_5230_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8916..9068)
DNA (153bp) protein (51aa)
Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_2_20cm_scaffold_5230_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9123..9884)
DNA (762bp) protein (254aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKW2_KORVE
LytR/AlgR family transcriptional regulator
Transcriptional regulator, LytR/AlgR family {ECO:0000313|EMBL:ABF42488.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
13_2_20cm_scaffold_5230_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9881..10948)
DNA (1068bp) protein (356aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKW1_KORVE
sensor signal transduction histidine kinase
Periplasmic sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABF42489.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sour
13_2_20cm_scaffold_5230_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10958..11797)
DNA (840bp) protein (280aa)
Putative transmembrane protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UY8_SOLUE
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABJ86527.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
13_2_20cm_scaffold_5230_14
unknown

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comp(11841..12209)
DNA (369bp) protein (123aa)

This feature has no annotations

13_2_20cm_scaffold_5230_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12479..13006
DNA (528bp) protein (176aa)
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
13_2_20cm_scaffold_5230_16

Not on your lists

13039..13311
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PZE0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00299.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_5230_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13364..14068
DNA (705bp) protein (235aa)
radical SAM family Fe-S protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Fe-S protein, radical SAM family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMF1_KORVE
radical SAM protein
Displaying 17 items

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