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13_2_20cm_scaffold_1617_4

Organism: 13_2_20CM_Acidobacteria_57_7

partial RP 28 / 55 BSCG 26 / 51 MC: 1 ASCG 7 / 38
Location: 4100..5578

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Herbaspirillum lusitanum RepID=UPI000363946C similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 472.0
  • Bit_score: 457
  • Evalue 1.40e-125
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJL92303.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 470.0
  • Bit_score: 454
  • Evalue 2.20e-124
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 497.0
  • Bit_score: 445
  • Evalue 2.10e-122

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGAAGCGCACCAGGCAATTCCCCGCCCTTATTGGGCTCGCTCTTGCTGTCCTCGTTGGCGGTTGCACGGTTGGGCCGAAGTACCAGCGTGCCACAGCGCCCGTGCCTGCAAAATGGGACGTCTCTGAACCCTGGCGCGAGAGCGCCCCAAAAGATGGCGTTGCCAAAGGCGAATGGTGGAGCGTGTTCGGCGACGACGAATTAAGCGCGCTGGAAAAACAAGCGCTTGATGCGAATCAGACCATCAAAATTTCCGCGGCGCGCCTGGAACAAGCCCGCGCTGCAGCGGGAATCCAAATTGCCACGCAGTTCCCCACGGTCGCAACAGCGCCGAGCGTTCAGCGCCAGCGTCTCTCGGGCAATCGTCCCACGAGCAGTAACTTTCCCACGAACGGTCCGGTGTCGCAGACAAACATTTCTCTGCCGTTCACGGTCGGCTATGAAGTGGATCTCCTTGGCCGGCGGAGGCGCAGCATTGAGGCAGCGCAGGCGTCGTACCAGGCCGCCGCTGCCGATCTCGAGAACGTGCGGTTGGTGATCACTGCGGAACTCGCGGGGGATTACTTCACGCTGCGGCAGCTTGATGCGGAGCTGGGGATTTTGCATCGCACAGTGGAAACGCTGGAGCGCGGATTGCAATTGGTGGACCAGCGGCACAAAGGTGGCGTTGCTTCCGGGCTGGATGTGGCGCAGGAAGAGACGCTGCTGAACACCACGCGGACGCAGGCGATCCTGCTCTTGCAACAGAGGAAACAGTTTGAAGACGCAATCGCCGTCCTGCTTGGGAAACCCGCCCCGGAATTTCACCTGCCCGGCAAAGAACTGAATGCGGAGCCTCCCGCACTCAATGCCGGTCTGCCTTCCGACTTGCTGGAGCGGCGGCCAGACGTCGCCGAAGCCGAACGGCAGATGGCCGTAGCGAATGCGCAAATCGGCATTGCGCGCGCGGCCTATTATCCTTCGCTGAATCTTTTCGGAAATGGCGGCTGGCAGGCCGCAGATATCGCCAAGCTGATGAACGTGCAGAGCACCTTCTGGGCCGTCGGCGCCAACGTCGCGGAAAGCATTTTCACCGGCGGATCGCGGCGCGCGCAGGTGCAATTCGCGAAAGCGGGATATGACGCCAGCGTGGCGGCCTATCGCGACAGTGTCTTGAATGCCTTTCGCGAAGTGCAGGATGATGTAACCGGCTTGACCGTGCTGGACCAGGCAAATCAGTCTCAGCAGCAAGCAGTTGACGCCGCGCGGCGCACGCTAGACATCGCGAACAGCCGCTACGTCGGCGGCCTTGTAAATTATCTGGATGTCGTCAACGCCCAGCAGAACCTGCTGAACAACGAGCAGCAGCTGGCCGTGATTCACGGGCAAAGGCTGGTAACGAGCGTGCTCCTCGTCAAGGCGCTGGGCGGCGGCTGGGATGCTTCGAGCCTTTCCGCTGTTCAAGTAAAGCCAAAGCTGAAAGACGTTGTCGCTCCGTAA
PROTEIN sequence
Length: 493
MKRTRQFPALIGLALAVLVGGCTVGPKYQRATAPVPAKWDVSEPWRESAPKDGVAKGEWWSVFGDDELSALEKQALDANQTIKISAARLEQARAAAGIQIATQFPTVATAPSVQRQRLSGNRPTSSNFPTNGPVSQTNISLPFTVGYEVDLLGRRRRSIEAAQASYQAAAADLENVRLVITAELAGDYFTLRQLDAELGILHRTVETLERGLQLVDQRHKGGVASGLDVAQEETLLNTTRTQAILLLQQRKQFEDAIAVLLGKPAPEFHLPGKELNAEPPALNAGLPSDLLERRPDVAEAERQMAVANAQIGIARAAYYPSLNLFGNGGWQAADIAKLMNVQSTFWAVGANVAESIFTGGSRRAQVQFAKAGYDASVAAYRDSVLNAFREVQDDVTGLTVLDQANQSQQQAVDAARRTLDIANSRYVGGLVNYLDVVNAQQNLLNNEQQLAVIHGQRLVTSVLLVKALGGGWDASSLSAVQVKPKLKDVVAP*