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13_2_20cm_scaffold_1617

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1617_1
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..2875
DNA (2874bp) protein (958aa)
Acriflavin resistance protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9TAA3_9RALS
Acriflavin resistance protein {ECO:0000313|EMBL:EPX99115.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp.
acriflavin resistance protein
13_2_20cm_scaffold_1617_2
unknown

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comp(3038..3517)
DNA (480bp) protein (160aa)

This feature has no annotations

13_2_20cm_scaffold_1617_3
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3681..4100
DNA (420bp) protein (140aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXR9_TERSS
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV83085.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanen
13_2_20cm_scaffold_1617_4
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4100..5578
DNA (1479bp) protein (493aa)
RND transporter n=1 Tax=Herbaspirillum lusitanum RepID=UPI000363946C
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJL92303.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
NodT family RND efflux system outer membrane lipoprotein
13_2_20cm_scaffold_1617_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5604..6623)
DNA (1020bp) protein (340aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372583E
beta-lactamase
13_2_20cm_scaffold_1617_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6843..7340
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TV8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86912.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_1617_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7475..9709)
DNA (2235bp) protein (745aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:CDM64452.1}; EC=3.4.14.5 {ECO:0000313|EMBL:CDM64452.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363CE67 rbh
peptidase S9B dipeptidylpeptidase IV domain-containing protein
13_2_20cm_scaffold_1617_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(9777..10121)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00035E784E
HIT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
histidine triad (HIT) protein
13_2_20cm_scaffold_1617_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10118..11008)
DNA (891bp) protein (297aa)
Rare lipoprotein A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PV4_SOLUE
rare lipoprotein A; K03642 rare lipoprotein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
rare lipoprotein A
13_2_20cm_scaffold_1617_10
unknown

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comp(10974..11234)
DNA (261bp) protein (87aa)

This feature has no annotations

13_2_20cm_scaffold_1617_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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11329..12249
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J9K1_9DELT
rhomboid family protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rhomboid family protein
13_2_20cm_scaffold_1617_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12358..12666
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG41_CHLTF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_1617_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12688..13245
DNA (558bp) protein (186aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF5_KORVE
CDP-alcohol phosphatidyltransferase
13_2_20cm_scaffold_1617_14
unknown

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comp(13296..13706)
DNA (411bp) protein (137aa)

This feature has no annotations

13_2_20cm_scaffold_1617_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13718..14389)
DNA (672bp) protein (224aa)
dxnH; 3-oxoadipate CoA-succinyl transferase, beta subunit (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dxnH; 3-oxoadipate CoA-succinyl transferase subunit beta (EC:2.8.3.5)
3-oxoadipate CoA-succinyl transferase, beta subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3E0_ACIC5
13_2_20cm_scaffold_1617_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14415..15107)
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase, subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPE1_CAUST rbh
13_2_20cm_scaffold_1617_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(15209..17341)
DNA (2133bp) protein (711aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilin
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003758A04 rbh
putative beta-galactosidase
13_2_20cm_scaffold_1617_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(17514..18392)
DNA (879bp) protein (293aa)
prephenate dehydrogenase (EC:1.3.1.12); K00210 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Prephenate dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISI5_KORVE
prephenate dehydrogenase
13_2_20cm_scaffold_1617_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18396..19415)
DNA (1020bp) protein (340aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:ABJ88779.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ABJ88779.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacteral
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NJ1_SOLUE
13_2_20cm_scaffold_1617_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19470..19766)
DNA (297bp) protein (99aa)
chorismate mutase; K04093 chorismate mutase [EC:5.4.99.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Chorismate mutase n=2 Tax=Rhodothermus marinus RepID=D0ME02_RHOM4
chorismate mutase, type II
13_2_20cm_scaffold_1617_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(19763..20278)
DNA (516bp) protein (172aa)
tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXC2_THERP
Displaying 21 items

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