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13_2_20cm_scaffold_3406

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3406_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..1053
-----------------
DNA (1053bp)
protein (351aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidete
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIH7_RHOM4
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
13_2_20cm_scaffold_3406_2
unknown

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1050..1394
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

13_2_20cm_scaffold_3406_3
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1369..2235
-----------------
DNA (867bp)
protein (289aa)
UPI0003D000EA related cluster n=1 Tax=unknown RepID=UPI0003D000EA
Uncharacterized protein {ECO:0000313|EMBL:EWC60783.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongi
hypothetical protein
13_2_20cm_scaffold_3406_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2246..2716
-----------------
DNA (471bp)
protein (157aa)
Putative acyltransferase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0ECK8_THECK
acetyltransferase Tax=RBG_16_Actinobacteria_68_12_curated
acyltransferase
13_2_20cm_scaffold_3406_5
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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2732..4138
-----------------
DNA (1407bp)
protein (469aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CCW34202.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadete
Dihydrolipoyl dehydrogenase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EV29_9BACT rbh
13_2_20cm_scaffold_3406_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4194..5381
-----------------
DNA (1188bp)
protein (396aa)
Transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEX1_SYNFM
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated
Fis family transcriptional regulator
13_2_20cm_scaffold_3406_7
unknown

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5749..5949
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

13_2_20cm_scaffold_3406_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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6035..6628
-----------------
DNA (594bp)
protein (198aa)
Cyclic nucleotide-binding protein n=1 Tax=Frankia sp. CN3 RepID=G6HGR8_9ACTO
Crp/Fnr family transcriptional regulator Tax=RBG_16_RIF_CHLX_69_14_curated
Crp/Fnr family transcriptional regulator
13_2_20cm_scaffold_3406_9
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6657..6962
-----------------
DNA (306bp)
protein (102aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWJ2_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KGN28896.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
Crp/Fnr family transcriptional regulator
13_2_20cm_scaffold_3406_10
unknown

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7014..7265
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

13_2_20cm_scaffold_3406_11
unknown

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7351..7464
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

13_2_20cm_scaffold_3406_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7480..8388)
-----------------
DNA (909bp)
protein (303aa)
L-amino acid amidase {ECO:0000313|EMBL:CDX26642.1}; EC=3.5.1.101 {ECO:0000313|EMBL:CDX26642.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
PREDICTED: uncharacterized protein LOC102335720 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C181A9
proline iminopeptidase
13_2_20cm_scaffold_3406_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

8470..8787
-----------------
DNA (318bp)
protein (106aa)
regulatory protein ArsR id=1247619 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
regulatory protein ArsR Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
regulatory protein ArsR
13_2_20cm_scaffold_3406_14
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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8771..9235
-----------------
DNA (465bp)
protein (155aa)
activator of Hsp90 ATPase 1 family protein id=1247618 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
activator of Hsp90 ATPase 1 family protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
13_2_20cm_scaffold_3406_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9232..9912
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULA5_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:ETW98875.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_2_20cm_scaffold_3406_16
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9899..10213
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000364985F
Uncharacterized protein {ECO:0000313|EMBL:KGM03633.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
13_2_20cm_scaffold_3406_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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10224..10649
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WP03_9NOCA
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Actinobacteria_67_10_curated
lactoylglutathione lyase
13_2_20cm_scaffold_3406_18
unknown

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comp(10783..10860)
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

Displaying 18 items

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