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13_2_20cm_scaffold_3774

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3774_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2..823
-----------------
DNA (822bp)
protein (274aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QMD7_DESAH
livM; leucine/isoleucine/valine transport system permease; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Actinobacteria_68_12_curated
branched-chain amino acid ABC transporter permease
13_2_20cm_scaffold_3774_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

826..1614
-----------------
DNA (789bp)
protein (263aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4D5_OCEP5 rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
amino acid/amide ABC transporter ATP-binding protein
13_2_20cm_scaffold_3774_3
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1970..2251
-----------------
DNA (282bp)
protein (94aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUW3_TRURR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADI14104.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (
13_2_20cm_scaffold_3774_4

Not on your lists

2241..3404
-----------------
DNA (1164bp)
protein (388aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003659709 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA14894.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
class V aminotransferase
13_2_20cm_scaffold_3774_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3607..4545)
-----------------
DNA (939bp)
protein (313aa)
Dyp-type peroxidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF2_KORVE rbh
Dyp-type peroxidase
Dyp-type peroxidase {ECO:0000313|EMBL:ABF39148.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain El
13_2_20cm_scaffold_3774_6
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4613..5371
-----------------
DNA (759bp)
protein (253aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BEA5_MEISD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH64963.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus sil
13_2_20cm_scaffold_3774_7
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5368..5571
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IQB7_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB21043.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
13_2_20cm_scaffold_3774_8
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5578..6021)
-----------------
DNA (444bp)
protein (148aa)
universal stress protein UspA n=1 Tax=Patulibacter americanus RepID=UPI0003B6E816
Universal stress protein {ECO:0000313|EMBL:EOM76705.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
universal stress protein UspA
13_2_20cm_scaffold_3774_9
unknown

Not on your lists

6207..7316
-----------------
DNA (1110bp)
protein (370aa)

This feature has no annotations

13_2_20cm_scaffold_3774_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7330..7776
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B46C6E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53471.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
13_2_20cm_scaffold_3774_11
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7779..8678)
-----------------
DNA (900bp)
protein (300aa)
glkA; glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:ADO68213.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ADO68213.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterac
Glucokinase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQA3_STIAD rbh
13_2_20cm_scaffold_3774_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9073..10110)
-----------------
DNA (1038bp)
protein (346aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8W9_CONWI rbh
alcohol dehydrogenase GroES domain protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADB52964.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
13_2_20cm_scaffold_3774_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10107..10808)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8X0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52965.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
13_2_20cm_scaffold_3774_14
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10805..11857)
-----------------
DNA (1053bp)
protein (351aa)
amidohydrolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5BFCC
Amidohydrolase 2 {ECO:0000313|EMBL:EWM11439.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
amidohydrolase
13_2_20cm_scaffold_3774_15
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(12088..14817)
-----------------
DNA (2730bp)
protein (910aa)
adenylyl cyclase class-3/4/guanylyl cyclase id=14630372 bin=bin8_Chloro species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylyl cyclase class-3/4/guanylyl cyclase Tax=CSP1_4_Chloroflexi
adenylyl cyclase class-3/4/guanylyl cyclase
13_2_20cm_scaffold_3774_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14795..15469)
-----------------
DNA (675bp)
protein (225aa)
cyaB; adenylate cyclase 2 (EC:4.6.1.1)
adenylyl cyclase class-3/4/guanylyl cyclase id=14632301 bin=bin9_gal15 species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
adenylyl cyclase class-3/4/guanylyl cyclase Tax=CSP1_3_Armatimonadetes
13_2_20cm_scaffold_3774_17
unknown

Not on your lists

comp(15656..16147)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

13_2_20cm_scaffold_3774_18

Not on your lists

comp(16260..16640)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM60986.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_3774_19
unknown

Not on your lists

comp(16644..17153)
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

13_2_20cm_scaffold_3774_20
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17277..17543)
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FVZ9_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK43936.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
13_2_20cm_scaffold_3774_21
unknown

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comp(17587..18078)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

13_2_20cm_scaffold_3774_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18724..18984
-----------------
DNA (261bp)
protein (87aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q147_RHIE6
Aldehyde-activating protein {ECO:0000313|EMBL:KDP76282.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" sourc
hypothetical protein
13_2_20cm_scaffold_3774_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19178..19546
-----------------
DNA (369bp)
protein (123aa)
cupin n=1 Tax=Patulibacter americanus RepID=UPI0003B54AEC
cupin Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_3774_24
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19636..20817
-----------------
DNA (1182bp)
protein (394aa)
histidine kinase n=1 Tax=Rhodococcus opacus RepID=UPI00029CCD47
Oxygen sensor histidine kinase nreB
Oxygen sensor histidine kinase nreB {ECO:0000313|EMBL:AHK34036.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
13_2_20cm_scaffold_3774_25
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21024..21467)
-----------------
DNA (444bp)
protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NZP6_STRVO
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEM83669.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptom
13_2_20cm_scaffold_3774_26
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21627..23486)
-----------------
DNA (1860bp)
protein (620aa)
Phenoxazinone synthase (EC:1.-.-.-)
Phenoxazinone synthase (PHS) n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WGD2_9ACTO
Phenoxazinone synthase (PHS) {ECO:0000313|EMBL:EFL23348.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATC
13_2_20cm_scaffold_3774_27
unknown

Not on your lists

23516..23653
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

13_2_20cm_scaffold_3774_28
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23720..25039)
-----------------
DNA (1320bp)
protein (440aa)
Adenylate cyclase id=3293337 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
adenylate/guanylate cyclase Tax=GWC2_RIF_CHLX_73_18_curated
adenylate/guanylate cyclase
13_2_20cm_scaffold_3774_29
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25506..26159
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI000366B5A2
Putative oxidoreductase {ECO:0000313|EMBL:GAJ83186.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
alcohol dehydrogenase GroES domain-containing protein
13_2_20cm_scaffold_3774_30
unknown

Not on your lists

comp(26454..26606)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

Displaying 30 items

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