ggKbase home page

13_2_20cm_scaffold_859

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_859_1
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2..640
-----------------
DNA (639bp)
protein (213aa)
ABC transporter ATP-binding protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPY3_9EURY
daunorubicin resistance ABC transporter ATPase subunit
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:ABN56261.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanocul
13_2_20cm_scaffold_859_2
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

651..1484
-----------------
DNA (834bp)
protein (278aa)
Daunorubicin resistance ABC transporter, inner membrane subunit B n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6W3_METSW
daunorubicin resistance ABC transporter, inner membrane subunit B
Daunorubicin resistance ABC transporter, inner membrane subunit B {ECO:0000313|EMBL:AEG19001.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae;
13_2_20cm_scaffold_859_3
unknown

Not on your lists

comp(1773..2180)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

13_2_20cm_scaffold_859_4
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2177..3616)
-----------------
DNA (1440bp)
protein (480aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036BDA33
MFS transporter {ECO:0000313|EMBL:KIF71373.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
major facilitator superfamily protein
13_2_20cm_scaffold_859_5
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3783..5228)
-----------------
DNA (1446bp)
protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;"
histidine kinase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000372C5B6
histidine kinase A domain-containing protein
13_2_20cm_scaffold_859_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(5225..5908)
-----------------
DNA (684bp)
protein (228aa)
Putative OmpR family two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6B6_CALAS
OmpR family two-component response regulator Tax=RBG_16_Chloroflexi_63_12_curated
putative OmpR family two-component response regulator
13_2_20cm_scaffold_859_7
unknown

Not on your lists

comp(5920..6576)
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

13_2_20cm_scaffold_859_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6705..7946)
-----------------
DNA (1242bp)
protein (414aa)
Putative major facilitator superfamily transporter n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RDF4_9ACTO
major facilitator superfamily protein Tax=GWC2_Nitrospirae_57_9_curated
putative major facilitator superfamily transporter
13_2_20cm_scaffold_859_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7943..8383)
-----------------
DNA (441bp)
protein (147aa)
Transcriptional regulator, MarR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIM2_RHITR
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGB69944.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
13_2_20cm_scaffold_859_10
unknown

Not on your lists

comp(8461..8916)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

13_2_20cm_scaffold_859_11
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9096..9890
-----------------
DNA (795bp)
protein (265aa)
Serine/threonine protein kinase PknB n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DHN7_9NOCA
serine/threonine protein kinase with PASTA sensor(s)
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:ACU53058.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.
13_2_20cm_scaffold_859_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9912..10397)
-----------------
DNA (486bp)
protein (162aa)
Transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8U3_CONWI
MarR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
MarR family transcriptional regulator
13_2_20cm_scaffold_859_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10411..10887)
-----------------
DNA (477bp)
protein (159aa)
MarR family transcriptional regulator id=12554322 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:KFE69044.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
MarR family transcriptional regulator
13_2_20cm_scaffold_859_14
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10954..11949
-----------------
DNA (996bp)
protein (332aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4W0_9ACTN
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
DrrA: daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY47397.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubro
13_2_20cm_scaffold_859_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11946..12593
-----------------
DNA (648bp)
protein (216aa)
Putative multidrug ABC transporter permease protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S0_9ACTN
putative multidrug ABC transporter permease protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC-2 type transporter
Displaying 15 items

View Taxonomy