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13_2_20cm_scaffold_1072

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1072_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..1026
DNA (1026bp) protein (342aa)
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=14627196 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ClpC ATPase
13_2_20cm_scaffold_1072_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1074..3308
DNA (2235bp) protein (745aa)
Surface antigen (D15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Surface antigen (D15) id=14627195 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Surface antigen (D15)
13_2_20cm_scaffold_1072_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3317..3907
DNA (591bp) protein (197aa)
Outer membrane chaperone Skp (OmpH) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative Outer membrane chaperone Skp (OmpH) id=3956968 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Outer membrane chaperone Skp (OmpH)
13_2_20cm_scaffold_1072_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3913..4947
DNA (1035bp) protein (345aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] id=14627193 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
13_2_20cm_scaffold_1072_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4940..5785
DNA (846bp) protein (282aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-3-O-acylglucosamine N-acyltransferase id=3956967 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1072_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5782..6813
DNA (1032bp) protein (344aa)
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase domain protein id=3956964 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase domain-containing protein
13_2_20cm_scaffold_1072_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6774..7607
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=3956961 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1072_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7597..8814
DNA (1218bp) protein (406aa)
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipid-A-disaccharide synthase id=3956956 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipid-A-disaccharide synthase
13_2_20cm_scaffold_1072_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8811..9473
DNA (663bp) protein (221aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4000034 bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1072_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9470..10744
DNA (1275bp) protein (425aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) id=3956951 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1072_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10741..11781
DNA (1041bp) protein (347aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase id=3956947 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1072_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11766..12254
DNA (489bp) protein (163aa)
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ADP-heptose--LPS heptosyltransferase II (Modular protein) id=3956942 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipopolysaccharide heptosyltransferase II
Displaying 12 items

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