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13_2_20cm_scaffold_1333

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1333_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..832
DNA (831bp) protein (277aa)
putative phytochrome sensor protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase, putative id=3963824 bin=GWA2_Methylomirabilis_73_35 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyclic nucleotide-binding protein
13_2_20cm_scaffold_1333_2
unknown

Not on your lists

910..1341
DNA (432bp) protein (144aa)

This feature has no annotations

13_2_20cm_scaffold_1333_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1349..2095)
DNA (747bp) protein (249aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase id=3963825 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1333_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2092..3009)
DNA (918bp) protein (306aa)
creatininase family protein; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Creatininase family protein id=3963826 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
creatininase family protein
13_2_20cm_scaffold_1333_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3006..4415)
DNA (1410bp) protein (470aa)
acyltransferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Phospholipid/glycerol acyltransferase id=3963827 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1333_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4412..4963)
DNA (552bp) protein (184aa)
id=14627426 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3296245 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_1333_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4960..6066)
DNA (1107bp) protein (369aa)
PrpF family protein; K09788 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
AcnD-accessory protein PrpF id=3841322 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PrpF family protein
13_2_20cm_scaffold_1333_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6063..7979)
DNA (1917bp) protein (639aa)
acnA; aconitate hydratase (EC:4.2.1.3) Tax=GWA2_Rokubacteria_73_35_curated
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase id=3841313 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1333_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8083..9213)
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase id=3963832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1333_10
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9276..9650)
DNA (375bp) protein (125aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_45_12_curated
Putative uncharacterized protein id=1352951 bin=GWE1_Spirochaete_60_18 species=Synechocystis sp. PCC 6803 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
hypothetical protein
13_2_20cm_scaffold_1333_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10062..10448
DNA (387bp) protein (129aa)
Rhodanese domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4J8_GEOUR
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ABQ26716.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
13_2_20cm_scaffold_1333_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10608..12347
DNA (1740bp) protein (580aa)
histidine kinase, HAMP region:chemotaxis sensory transducer Tax=GWA2_Rokubacteria_70_23_curated
Histidine kinase, HAMP region:chemotaxis sensory transducer id=2322387 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine kinase, HAMP region:chemotaxis sensory transducer
13_2_20cm_scaffold_1333_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12366..13274)
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=3713094 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1333_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13321..14991)
DNA (1671bp) protein (557aa)
hypothetical protein; K01576 benzoylformate decarboxylase [EC:4.1.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase id=3713089 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1333_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15128..16090
DNA (963bp) protein (321aa)
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uroporphyrinogen decarboxylase id=4216374 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
13_2_20cm_scaffold_1333_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16090..17013
DNA (924bp) protein (308aa)
ferrochelatase (EC:4.99.1.1) Tax=GWA2_Rokubacteria_73_35_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase id=4998219 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1333_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17010..18407
DNA (1398bp) protein (466aa)
protoporphyrinogen oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protoporphyrinogen oxidase id=4998220 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protoporphyrinogen oxidase
13_2_20cm_scaffold_1333_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18332..18919)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Aplysina aerophoba bacterial symbiont clone AANRPS RepID=F8S308_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_scaffold_1333_19
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18942..19196
DNA (255bp) protein (85aa)
HAD family hydrolase n=1 Tax=mine drainage metagenome RepID=T0YMV9_9ZZZZ
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
Displaying 19 items

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