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13_2_20cm_scaffold_1412

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1412_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..489
DNA (489bp) protein (163aa)
4-coumarate--CoA ligase (EC:6.2.1.12) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Dicarboxylate-CoA ligase PimA n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HLB7_9ACTO
AMP-dependent synthetase and ligase
13_2_20cm_scaffold_1412_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

486..1301
DNA (816bp) protein (272aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein id=14627593 bin=bin7_NC10_sister species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
13_2_20cm_scaffold_1412_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1425..2438
DNA (1014bp) protein (338aa)
TPR repeat id=4221516 bin=GWA2_Methylomirabilis_73_35 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_1412_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2519..4855
DNA (2337bp) protein (779aa)
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative transmembrane signal transduction receptor and sigma-54 dependent response regulator id=4221518 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator
13_2_20cm_scaffold_1412_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5581..7617
DNA (2037bp) protein (679aa)
Putative uncharacterized protein id=4221592 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein; K07114 uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1412_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7617..8225
DNA (609bp) protein (203aa)
sortase family protein, Peptidase C60; K07284 sortase A [EC:3.4.22.70] Tax=GWA2_Rokubacteria_73_35_curated
Sortase family protein, Peptidase C60 id=4221594 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sortase family protein, Peptidase C60
13_2_20cm_scaffold_1412_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8179..8967)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036969D2
enoyl-CoA hydratase/isomerase family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
enoyl-CoA hydratase
13_2_20cm_scaffold_1412_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8964..9536)
DNA (573bp) protein (191aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Geobacillus thermoglucosidasius (strain C56-YS93) RepID=F8D145_GEOTC
Uncharacterized protein {ECO:0000313|EMBL:ETW96301.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_scaffold_1412_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(9648..10091)
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=4141959 bin=GWA2_Methylomirabilis_73_35 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glyoxalase/bleomycin resistance protein/dioxygenase Tax=GWA2_Rokubacteria_73_35_curated
Glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_scaffold_1412_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(10125..11354)
DNA (1230bp) protein (410aa)
Extracellular ligand-binding receptor Tax=GWC2_Rokubacteria_70_16_curated
Extracellular ligand-binding receptor id=2654115 bin=GWC2_Methylomirabilis_70_24 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Extracellular ligand-binding receptor
13_2_20cm_scaffold_1412_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11351..11692)
DNA (342bp) protein (114aa)
Putative uncharacterized protein id=4400769 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_1412_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11740..12852
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QMG2_BORBO
LVIVD repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_scaffold_1412_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12864..14132)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037D6E22 rbh
two component sensor histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
two component sensor histidine kinase
13_2_20cm_scaffold_1412_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14132..14800)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC41D rbh
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
winged helix family two component transcriptional regulator
13_2_20cm_scaffold_1412_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14831..15190)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDI3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX09667.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
hypothetical protein
Displaying 15 items

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