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13_2_20cm_scaffold_1983

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1983_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4..939)
DNA (936bp) protein (312aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein MkanA1_05815 id=2589429 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase domain-containing protein
13_2_20cm_scaffold_1983_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

970..1806
DNA (837bp) protein (279aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCS9_9BRAD
enoyl-CoA hydratase Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_1983_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1803..2522
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B54EA1
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_1983_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2608..2952
DNA (345bp) protein (115aa)
putative Endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
COG0251: Putative translation initiation inhibitor, yjgF family id=2642970 bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1983_5
unknown

Not on your lists

comp(2802..3206)
DNA (405bp) protein (135aa)

This feature has no annotations

13_2_20cm_scaffold_1983_6
unknown

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comp(3419..3511)
DNA (93bp) protein (31aa)

This feature has no annotations

13_2_20cm_scaffold_1983_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3634..4044
DNA (411bp) protein (137aa)
TgaE id=4143218 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkanal monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
alkanal monooxygenase
13_2_20cm_scaffold_1983_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4063..4995)
DNA (933bp) protein (311aa)
Putative F420-dependent oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUB3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETW96391.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like protein
13_2_20cm_scaffold_1983_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5092..5799)
DNA (708bp) protein (236aa)
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31) Tax=RIFCSPLOWO2_02_FULL_Roku
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31) id=14625474 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31)
13_2_20cm_scaffold_1983_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5859..6368)
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=2961275 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_1983_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6845..7504)
DNA (660bp) protein (220aa)
Hydrolase n=1 Tax=Burkholderia sp. SJ98 RepID=K8RBG1_9BURK
Hydrolase {ECO:0000313|EMBL:KJR61602.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hydrolase
13_2_20cm_scaffold_1983_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7501..8946)
DNA (1446bp) protein (482aa)
aminopeptidase P (EC:3.4.11.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aminopeptidase P (EC:3.4.11.9)
Peptidase M24 id=2937755 bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1983_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8967..9839
DNA (873bp) protein (291aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=2642971 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_2_20cm_scaffold_1983_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9863..11047
DNA (1185bp) protein (395aa)
fadA; 3-ketoacyl-CoA thiolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable thiolase id=2937759 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
fadA; 3-ketoacyl-CoA thiolase
13_2_20cm_scaffold_1983_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11050..11829
DNA (780bp) protein (260aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR id=3352303 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobiaceae bacterium SG-6C genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fabG; 3-ketoacyl-ACP reductase Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_1983_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11826..12335
DNA (510bp) protein (170aa)
Ferripyochelin binding protein (Fbp) id=3864205 bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ferripyochelin binding protein (fbp) Tax=GWC2_Rokubacteria_70_16_curated
ferripyochelin binding protein (fbp)
13_2_20cm_scaffold_1983_17
unknown

Not on your lists

12392..12637
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_1983_18
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12716..14716
DNA (2001bp) protein (667aa)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C22
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:KFE68323.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangi
sensor protein
13_2_20cm_scaffold_1983_19
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(14752..15591)
DNA (840bp) protein (280aa)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036892EA
3-oxoacyl-ACP reductase Tax=RBG_16_NC10_65_8_curated
3-oxoacyl-ACP reductase
13_2_20cm_scaffold_1983_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

15643..16542
DNA (900bp) protein (300aa)
DNA repair photolyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q117_9FIRM id=5225484 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
radical SAM protein Tax=RBG_16_RIF_WS3X_71_46_curated
radical SAM protein
13_2_20cm_scaffold_1983_21
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

16542..16679
DNA (138bp) protein (46aa)
NHL repeat containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TL06_9CHLR
alkyl hydroperoxide reductase
Tax=BJP_IG2158_Zixibacteria_48_33
13_2_20cm_scaffold_1983_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16695..18005
DNA (1311bp) protein (437aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T0_SPHTD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACZ39247.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacteri
13_2_20cm_scaffold_1983_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18259..18978
DNA (720bp) protein (240aa)
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator id=14626080 bin=bin7_NC10_sister species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator, GntR family
13_2_20cm_scaffold_1983_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18993..19772
DNA (780bp) protein (260aa)
fixA; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer flavoprotein, beta subunit id=2475787 bin=GWC2_Methylomirabilis_70_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
electron transfer flavoprotein beta-subunit
13_2_20cm_scaffold_1983_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19821..20798
DNA (978bp) protein (326aa)
etfA2; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer flavoprotein, alpha subunit id=3618731 bin=GWF2_Methylomirabilis_70_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
etfA3; electron transfer flavoprotein subunit alpha
13_2_20cm_scaffold_1983_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

20814..21809
DNA (996bp) protein (332aa)
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] id=14626083 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] Tax=CSP1_6_Rokubacteria
acyl-CoA dehydrogenase domain-containing protein
Displaying 26 items

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