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13_2_20cm_scaffold_210

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_210_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(163..990)
DNA (828bp) protein (276aa)
putative L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable L-aspartate dehydrogenase id=4115298 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative L-aspartate dehydrogenase
13_2_20cm_scaffold_210_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1024..1884
DNA (861bp) protein (287aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4115299 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_210_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1877..3265
DNA (1389bp) protein (463aa)
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Conserved uncharacterized protein id=4115300 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RmuC-domain-containing protein
13_2_20cm_scaffold_210_4
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3272..5173)
DNA (1902bp) protein (634aa)
Glr3452 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFS2_GLOVI
hypothetical protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
13_2_20cm_scaffold_210_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5214..5444
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4555259 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_210_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5413..6654
DNA (1242bp) protein (414aa)
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase id=4555257 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
13_2_20cm_scaffold_210_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6654..7895
DNA (1242bp) protein (414aa)
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4961237 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dioxygenase
13_2_20cm_scaffold_210_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8079..8534
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=4961238 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K09986 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_210_9
unknown

Not on your lists

8554..8889
DNA (336bp) protein (112aa)

This feature has no annotations

13_2_20cm_scaffold_210_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8963..10639
DNA (1677bp) protein (559aa)
Benzoylformate decarboxylase (EC:4.1.1.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thiamine pyrophosphate TPP-binding domain-containing protein; K01576 benzoylformate decarboxylase [EC:4.1.1.7] id=14627836 bin=bin7_NC10_sister species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
Benzoylformate decarboxylase (EC:4.1.1.7)
13_2_20cm_scaffold_210_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10639..12255
DNA (1617bp) protein (539aa)
thiamine pyrophosphate-dependent protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate protein TPP binding domain protein id=3441750 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
thiamine pyrophosphate protein TPP binding domain-containing protein
13_2_20cm_scaffold_210_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12428..12988
DNA (561bp) protein (187aa)
OmpA/MotB domain protein id=14626729 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
OmpA/MotB domain protein Tax=CSP1_6_Rokubacteria
peptidoglycan-associated lipoprotein
13_2_20cm_scaffold_210_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13031..14137)
DNA (1107bp) protein (369aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
Alanine dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALQ1_AZOBR
ald; alanine dehydrogenase
13_2_20cm_scaffold_210_14
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14250..15056
DNA (807bp) protein (269aa)
Putative short-chain dehydrogenase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCI8_9BRAD
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC54186.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
putative short-chain dehydrogenase
13_2_20cm_scaffold_210_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15099..15299)
DNA (201bp) protein (67aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Cold-shock DNA-binding domain protein id=2197703 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cold-shock DNA-binding domain-containing protein
13_2_20cm_scaffold_210_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15542..16678
DNA (1137bp) protein (379aa)
fatty acid desaturase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fatty acid desaturase id=14625248 bin=bin7_NC10_sister species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fatty acid desaturase
13_2_20cm_scaffold_210_17
unknown

Not on your lists

16872..17087
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_210_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17087..17299
DNA (213bp) protein (71aa)
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 id=14626055 bin=bin7_NC10_sister species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=CSP1_6_Rokubacteria
rpsU; 30S ribosomal protein S21
13_2_20cm_scaffold_210_19
unknown

Not on your lists

17292..17708
DNA (417bp) protein (139aa)

This feature has no annotations

13_2_20cm_scaffold_210_20
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17718..17990)
DNA (273bp) protein (91aa)
redoxin Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646434 bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peroxiredoxin
13_2_20cm_scaffold_210_21
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18054..18263)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96974.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_2_20cm_scaffold_210_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18293..18808)
DNA (516bp) protein (172aa)
resA; thiol-disulfide oxidoreductase resA id=14626589 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
resA; thiol-disulfide oxidoreductase resA Tax=CSP1_6_Rokubacteria
putative thiol-disulfide oxidoreductase
13_2_20cm_scaffold_210_23
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18955..19926
DNA (972bp) protein (324aa)
NADPH:quinone reductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTR1_CORCM
qor2; NADPH:quinone reductase
NADPH:quinone reductase {ECO:0000313|EMBL:AFE10064.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_2_20cm_scaffold_210_24
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20012..20317
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97553.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Displaying 24 items

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