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13_2_20cm_scaffold_238

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_238_1
unknown

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2..142
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_scaffold_238_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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139..1623
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PLM7_9EURY rbh
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_2_20cm_scaffold_238_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1637..2824
DNA (1188bp) protein (396aa)
Amidohydrolase family protein n=1 Tax=Microcystis aeruginosa TAIHU98 RepID=L7E9H0_MICAE
Uncharacterized protein {ECO:0000313|EMBL:ETX07255.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
barH; BarH
13_2_20cm_scaffold_238_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2869..3846
DNA (978bp) protein (326aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] id=14625736 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=CSP1_6_Rokubacteria
cupin
13_2_20cm_scaffold_238_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3883..4812)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4M0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52477.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
13_2_20cm_scaffold_238_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4969..5772
DNA (804bp) protein (268aa)
lipoate protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Octanoyltransferase LipM id=5020377 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
biotin/lipoate A/B protein ligase
13_2_20cm_scaffold_238_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5783..6220
DNA (438bp) protein (146aa)
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX family hydrolase id=5020378 bin=GWA2_Methylomirabilis_73_35 species=Thermoproteus tenax genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_2_20cm_scaffold_238_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6217..7695
DNA (1479bp) protein (493aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=GWA2_Rokubacteria_73_35_curated
pepA; leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=5020379 bin=GWA2_Methylomirabilis_73_35 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_238_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7692..8522
DNA (831bp) protein (277aa)
metal-dependent phosphoesterase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PHP domain protein id=5020380 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PHP domain-containing protein
13_2_20cm_scaffold_238_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8566..8946
DNA (381bp) protein (127aa)
ArsC family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ArsC family protein id=5020381 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenate reductase like protein
13_2_20cm_scaffold_238_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8950..10263
DNA (1314bp) protein (438aa)
Putative amidohydrolase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI17_9BURK
Putative amidohydrolase {ECO:0000313|EMBL:EHR70891.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI
conserved exported hypothetical protein
13_2_20cm_scaffold_238_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10297..11142
DNA (846bp) protein (282aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=CSP1_6_Rokubacteria
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14626572 bin=bin7_NC10_sister species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dienelactone hydrolase
13_2_20cm_scaffold_238_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11347..12189)
DNA (843bp) protein (281aa)
Thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thioesterase superfamily protein id=5020384 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_238_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12203..13474
DNA (1272bp) protein (424aa)
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member id=4165967 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
13_2_20cm_scaffold_238_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13471..14019
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=5020386 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_238_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14022..14957
DNA (936bp) protein (312aa)
26S proteasome subunit P45 family (EC:3.6.4.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Proteasome-activating nucleotidase id=4830684 bin=GWC2_Methylomirabilis_70_16 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
proteasome-activating nucleotidase
13_2_20cm_scaffold_238_17
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

14963..15868
DNA (906bp) protein (302aa)
Methyltransferase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GZA9_STRC2
ubiquinone/menaquinone biosynthesis methylase
methyltransferase type 11 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
13_2_20cm_scaffold_238_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15868..16287
DNA (420bp) protein (140aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4830683 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thioesterase superfamily protein
13_2_20cm_scaffold_238_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16309..17325
DNA (1017bp) protein (339aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter id=14626741 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter
13_2_20cm_scaffold_238_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17322..18089
DNA (768bp) protein (256aa)
multi-copper enzyme maturation ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
multi-copper enzyme maturation ABC transporter permease id=14626740 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
multi-copper enzyme maturation ABC transporter permease
13_2_20cm_scaffold_238_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18086..19540
DNA (1455bp) protein (485aa)
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like id=4034167 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gliding motility ABC transporter auxillary protein Tax=GWA2_Rokubacteria_73_35_curated
gliding motility ABC transporter auxillary protein
13_2_20cm_scaffold_238_22
unknown

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19495..19584
DNA (90bp) protein (30aa)

This feature has no annotations

13_2_20cm_scaffold_238_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19596..21356
DNA (1761bp) protein (587aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626738 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_238_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(21393..22358)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036724AA
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_2_20cm_scaffold_238_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22435..23151
DNA (717bp) protein (239aa)
Beta-lactamase-like id=4034158 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase-like Tax=GWA2_Rokubacteria_73_35_curated
Beta-lactamase-like
13_2_20cm_scaffold_238_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23156..23449)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=4034157 bin=GWA2_Methylomirabilis_73_35 species=Agrobacterium fabrum genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Displaying 26 items

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