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13_2_20cm_scaffold_3365

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3365_1
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..634)
DNA (633bp) protein (211aa)
ABC transport system permease protein YcjP n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ETF0_CUPNN
ycjP; ABC transporter permease
ABC transport system permease protein YcjP {ECO:0000313|EMBL:AEI75621.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source=
13_2_20cm_scaffold_3365_2
R_NC10_66_22, NC10, Bacteria

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comp(631..1578)
DNA (948bp) protein (316aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative uncharacterized protein id=3709051 bin=GWC2_Methylomirabilis_70_24 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_3365_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1578..2621)
DNA (1044bp) protein (348aa)
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter id=2930701 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerol-3-phosphate ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
glycerol-3-phosphate ABC transporter ATP-binding protein
13_2_20cm_scaffold_3365_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(2633..3484)
DNA (852bp) protein (284aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Probable sugar ABC transporter, permease protein id=3709050 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
sugar ABC transporter permease
13_2_20cm_scaffold_3365_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3634..4602)
DNA (969bp) protein (323aa)
Putative uncharacterized protein id=3842142 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_3365_6
R_NC10_66_22, NC10, Bacteria

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comp(4603..5889)
DNA (1287bp) protein (429aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=3842144 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
sugar ABC transporter substrate-binding protein
13_2_20cm_scaffold_3365_7
R_NC10_66_22, NC10, Bacteria

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comp(5908..7215)
DNA (1308bp) protein (436aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=3239155 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
sugar ABC transporter substrate-binding protein
13_2_20cm_scaffold_3365_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7364..8581)
DNA (1218bp) protein (406aa)
Uncharacterized protein id=2228896 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
membrane protein
13_2_20cm_scaffold_3365_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8609..9706
DNA (1098bp) protein (366aa)
Putative integral membrane protein id=2228897 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein Tax=GWA2_Rokubacteria_73_35_curated
integral membrane protein
13_2_20cm_scaffold_3365_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(9638..10822)
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 id=2228940 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily protein
13_2_20cm_scaffold_3365_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(10819..11547)
DNA (729bp) protein (243aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=14627264 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
13_2_20cm_scaffold_3365_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(11544..12152)
DNA (609bp) protein (203aa)
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase Tax=CSP1_6_Rokubacteria
putative luciferase-like monooxygenase
Displaying 12 items

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