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13_2_20cm_scaffold_3886

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3886_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1..1308
DNA (1308bp) protein (436aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Ralstonia sp. PBA RepID=I9BXF9_9RALS
FIG01198985: hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FIG01198985: hypothetical protein
13_2_20cm_scaffold_3886_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1305..2480
DNA (1176bp) protein (392aa)
Blr6118 protein id=3732187 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_3886_3
Thermus sp. RL, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(2493..3944)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003679CBD
4-hydroxyphenylacetate 3-monooxygenase {ECO:0000313|EMBL:EIA39211.1}; TaxID=456163 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. RL.;"
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component
13_2_20cm_scaffold_3886_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4020..4505
DNA (486bp) protein (162aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=4122811 bin=GWC2_Methylomirabilis_70_16 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_3886_5
unknown

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4714..5445
DNA (732bp) protein (244aa)

This feature has no annotations

13_2_20cm_scaffold_3886_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5496..6953
DNA (1458bp) protein (486aa)
Putative permease (Major facilitator superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7Q2_UNCMA
major facilitator superfamily permease Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
major facilitator superfamily permease
13_2_20cm_scaffold_3886_7
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6961..8439)
DNA (1479bp) protein (493aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDS48710.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDS48710.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDS
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VB05_9BRAD
13_2_20cm_scaffold_3886_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8475..9017)
DNA (543bp) protein (181aa)
hypothetical protein; K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FEDF0E
3-hydroxybutyryl-CoA dehydratase
13_2_20cm_scaffold_3886_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9032..10225)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036217C3 rbh
CoA-transferase {ECO:0000313|EMBL:ETR76211.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_2_20cm_scaffold_3886_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10242..11066
DNA (825bp) protein (275aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=14625871 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Uncharacterized protein {ECO:0000313|EMBL:ETX08573.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_scaffold_3886_11
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11066..11950
DNA (885bp) protein (295aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (2,4-D dioxygenase) {ECO:0000313|EMBL:CCE03434.1}; EC=1.14.11.17 {ECO:0000313|EMBL:CCE03434.1};; TaxID=551936 species="Bacteria; Pr
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC:1.14.11.17)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (2,4-D dioxygenase) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TAF7_9BRAD
13_2_20cm_scaffold_3886_12
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12043..12924)
DNA (882bp) protein (294aa)
Putative F420-dependent oxidoreductase, MSMEG_3544 family id=2767983 bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAN04370.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
13_2_20cm_scaffold_3886_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12921..13793)
DNA (873bp) protein (291aa)
N-formylglutamate deformylase (EC:3.5.1.68); K01458 N-formylglutamate deformylase [EC:3.5.1.68] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
formiminoglutamase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003824127
N-formylglutamate amidohydrolase
13_2_20cm_scaffold_3886_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13825..14712
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036687D8
5'-3' exonuclease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
5'-3' exonuclease
13_2_20cm_scaffold_3886_15
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14705..15526)
DNA (822bp) protein (274aa)
phytanoyl-CoA dioxygenase; K10674 ectoine hydroxylase [EC:1.14.11.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2J6_RAMTT rbh
hypothetical protein
Displaying 15 items

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