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13_2_20cm_scaffold_410

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_410_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2..391)
DNA (390bp) protein (130aa)
conserved protein of unknown function; putative thioesterase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4829157 bin=GWC2_Methylomirabilis_70_16 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_410_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(388..1296)
DNA (909bp) protein (303aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase id=4472507 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_410_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1296..1790)
DNA (495bp) protein (165aa)
endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Endoribonuclease L-PSP id=4472509 bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation inhibitor
13_2_20cm_scaffold_410_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2099..2908
DNA (810bp) protein (270aa)
Nucleotidyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Nucleotidyl transferase id=14626807 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Nucleotidyl transferase
13_2_20cm_scaffold_410_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2950..3333
DNA (384bp) protein (128aa)
Sensory box histidine kinase/response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPS3_MYXFH
sensory box histidine kinase/response regulator
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AEI62946.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoc
13_2_20cm_scaffold_410_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3379..4161
DNA (783bp) protein (261aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4472514 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_410_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4203..5297
DNA (1095bp) protein (365aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3'-5' exonuclease id=4472621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3'-5' exonuclease
13_2_20cm_scaffold_410_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5311..5757
DNA (447bp) protein (149aa)
CoA-binding domain protein id=4472625 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CoA-binding domain-containing protein; K06929 Tax=GWA2_Rokubacteria_73_35_curated
CoA-binding domain-containing protein
13_2_20cm_scaffold_410_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5758..7437
DNA (1680bp) protein (560aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related protein id=4472628 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_2_20cm_scaffold_410_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7415..8068)
DNA (654bp) protein (218aa)
Spermidine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Spermidine synthase id=4472637 bin=GWA2_Methylomirabilis_73_35 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_410_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8325..9092)
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35)
hsd17b10, abad, camr, erab, hadh2, hcd2, hsd10, mhbd, mrpp2, mrx17, mrx31, mrxs10, schad, sdr5c1; hydroxysteroid (17-beta) dehydrogenase 10; K08683 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methyl
putative short chain dehydrogenase id=4472638 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_410_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9151..10743
DNA (1593bp) protein (531aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=4478783 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
radical SAM domain-containing protein
13_2_20cm_scaffold_410_13
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10835..12850)
DNA (2016bp) protein (672aa)
Cardiolipin synthetase {ECO:0000313|EMBL:CDS54800.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDS54800.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; P
Phospholipase D/Transphosphatidylase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJZ2_THIDA
phospholipase D/transphosphatidylase
13_2_20cm_scaffold_410_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12931..13686
DNA (756bp) protein (252aa)
peptidase, M50 family protein (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative membrane-associated zinc metallopeptidase (EC:3.4.24.-)
Peptidase M50 id=2319281 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_410_15
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13844..16021)
DNA (2178bp) protein (726aa)
Putative amylo-alpha-1,6-glucosidase n=1 Tax=planctomycete KSU-1 RepID=I3IPX7_9PLAN rbh
Putative amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:GAB63772.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;
amylo-alpha-16-glucosidase
13_2_20cm_scaffold_410_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

16060..17103
DNA (1044bp) protein (348aa)
group 1 glycosyl transferase id=14430920 bin=bin3_NC10 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative glycosyltransferase
group 1 glycosyl transferase Tax=CSP1_5_NC10
13_2_20cm_scaffold_410_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17160..17672)
DNA (513bp) protein (171aa)
Plasma membrane H+-transporting two-sector ATPase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6U4_AZOS1
peptidoglycan binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
plasma membrane H+-transporting two-sector ATPase
13_2_20cm_scaffold_410_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17752..18831)
DNA (1080bp) protein (360aa)
Putative glucose-fructose oxidoreductase oxidoreductase protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGN6_THIDA
glucose-fructose oxidoreductase
Putative glucose-fructose oxidoreductase oxidoreductase protein {ECO:0000313|EMBL:AAZ98211.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales;
13_2_20cm_scaffold_410_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19046..19573
DNA (528bp) protein (176aa)
RecA domain protein id=4472640 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
recombinase A Tax=GWA2_Rokubacteria_73_35_curated
recombinase A
13_2_20cm_scaffold_410_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19561..21048
DNA (1488bp) protein (496aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4472641 bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_410_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21278..24538
DNA (3261bp) protein (1087aa)
dnaE1; DNA polymerase III, alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Error-prone DNA polymerase, DnaE-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJA3_KORVE
DNA polymerase III subunit alpha
13_2_20cm_scaffold_410_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24593..24988
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_410_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24952..25254
DNA (303bp) protein (101aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_410_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

25300..26229
DNA (930bp) protein (310aa)
ATP dependent DNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NN0_SOLUE
ATP dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ABJ88740.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitat
13_2_20cm_scaffold_410_25
unknown

Not on your lists

26250..26462
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_410_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26588..27328)
DNA (741bp) protein (247aa)
Putative uncharacterized protein id=2811602 bin=GWC2_Methylomirabilis_70_24 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying 26 items

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