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13_2_20cm_scaffold_646

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_646_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94..849)
DNA (756bp) protein (252aa)
Putative cyclase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T9H8_9BRAD rbh
Cyclase {ECO:0000313|EMBL:EWY41731.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB2
cyclase
13_2_20cm_scaffold_646_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1147..2595)
DNA (1449bp) protein (483aa)
propionate catabolism protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
MmgE/PrpD family protein id=4117730 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MmgE/PrpD family protein
13_2_20cm_scaffold_646_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2632..4512
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037C1266
Uncharacterized protein {ECO:0000313|EMBL:ETW95447.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
monooxygenase
13_2_20cm_scaffold_646_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

4509..5537
DNA (1029bp) protein (343aa)
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Candidate ABC type Fe3+ transport system, periplasmic component id=1901315 bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein
13_2_20cm_scaffold_646_5
unknown

Not on your lists

comp(5653..5784)
DNA (132bp) protein (44aa)

This feature has no annotations

13_2_20cm_scaffold_646_6
unknown

Not on your lists

comp(6010..6204)
DNA (195bp) protein (65aa)

This feature has no annotations

13_2_20cm_scaffold_646_7
unknown

Not on your lists

comp(6535..6726)
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_646_8
unknown

Not on your lists

comp(6778..7059)
DNA (282bp) protein (94aa)

This feature has no annotations

13_2_20cm_scaffold_646_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7269..7916
DNA (648bp) protein (216aa)
short chain alcohol dehydrogenase, putative (EC:1.1.1.100) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JB15_FRASU
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_646_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7919..9028
DNA (1110bp) protein (370aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL05375.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamic
Spermidine/putrescine ABC transporter ATPase subunit id=4790535 bin=GWC2_Methylomirabilis_70_16 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Putrescine transport ATP-binding protein
13_2_20cm_scaffold_646_11
unknown

Not on your lists

9049..9300
DNA (252bp) protein (84aa)

This feature has no annotations

13_2_20cm_scaffold_646_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(9310..10026)
DNA (717bp) protein (239aa)
livF; putative high-affinity branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Branched-chain amino acid transport ATP-binding protein LivF id=3109909 bin=GWF2_Methylomirabilis_70_14 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
13_2_20cm_scaffold_646_13
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(10031..10750)
DNA (720bp) protein (240aa)
livG; putative branched-chain amino acid ABC transporter ATP-binding component; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curate
Putative branched-chain amino acid ABC transporter ATP-binding component id=3109910 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG; branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_646_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10750..11688)
DNA (939bp) protein (313aa)
Branched-chain amino acid transport system permease protein LivM id=4166560 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH; putative branched chain amino acid ABC transporter permease component; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
livH; branched chain amino acid ABC transporter permease
13_2_20cm_scaffold_646_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11685..12527)
DNA (843bp) protein (281aa)
livM; putative branched-chain amino acid ABC transporter permease component; K01997 branched-chain amino acid transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Putative branched-chain amino acid ABC transporter permease component id=4346127 bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livM; branched-chain amino acid ABC transporter permease
13_2_20cm_scaffold_646_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12570..13850)
DNA (1281bp) protein (427aa)
Extracellular ligand-binding receptor id=3987077 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livJ; putative branched-chain amino acid ABC transporter binding component; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter substrate-binding protein
13_2_20cm_scaffold_646_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13925..16246)
DNA (2322bp) protein (774aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWC2_Rokubacteria_70_16_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=3162221 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_646_18
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16246..17082)
DNA (837bp) protein (279aa)
Putative ABC transporter permease protein n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1VT54_STRGG
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49985.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
ABC transporter permease
13_2_20cm_scaffold_646_19
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17084..17914)
DNA (831bp) protein (277aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3W7_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:EWY37203.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
ABC transporter
13_2_20cm_scaffold_646_20
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17922..19028)
DNA (1107bp) protein (369aa)
Hypothetical ABC transporter substrate binding protein n=1 Tax=uncultured prokaryote AT5 RepID=D3W8J4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EWY37199.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
ssuA1; Pyrimidine precursor biosynthesis enzyme THI13
13_2_20cm_scaffold_646_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19066..20352)
DNA (1287bp) protein (429aa)
Predicted amidohydrolase n=1 Tax=uncultured alpha proteobacterium HF0130_06E21 RepID=E0XT06_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EWY37200.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
hypothetical protein
13_2_20cm_scaffold_646_22
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20362..21180)
DNA (819bp) protein (273aa)
catD1; 3-oxoadipate enol-lactonase (EC:3.1.1.24)
3-oxoadipate enol-lactonase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2KF59_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EWY37201.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
13_2_20cm_scaffold_646_23
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21177..21926)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036558E1
GntR family transcriptional regulator
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP01883.1}; TaxID=477245 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strep
13_2_20cm_scaffold_646_24
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22007..22486)
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=1718108 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
13_2_20cm_scaffold_646_25
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

22748..23167
DNA (420bp) protein (140aa)
GAF sensor hybrid histidine kinase Tax=RBG_16_Zixibacteria_43_9_curated
GAF sensor hybrid histidine kinase id=1250979 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
two component transcriptional regulator, winged helix family
13_2_20cm_scaffold_646_26
unknown

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23263..23469
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_scaffold_646_27
unknown

Not on your lists

23466..24209
DNA (744bp) protein (248aa)

This feature has no annotations

13_2_20cm_scaffold_646_28
Glycine max, Glycine, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

24491..25294
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Glycine max RepID=I1KQ33_SOYBN
leucine-rich repeat extensin-like protein 4-like
Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G04390.1}; TaxID=3847 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons
13_2_20cm_scaffold_646_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25794..27026
DNA (1233bp) protein (411aa)
Di-heme cytochrome-c peroxidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8P7_MYXSD
di-heme cytochrome-c peroxidase
Di-heme cytochrome-c peroxidase {ECO:0000313|EMBL:AGC43917.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
13_2_20cm_scaffold_646_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27166..27840
DNA (675bp) protein (225aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=24594421 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Displaying items 1-30 of 49 in total

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