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13_2_20cm_scaffold_11138_7

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(4649..5230)

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 194.0
  • Bit_score: 253
  • Evalue 2.30e-64
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14627622 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 195.0
  • Bit_score: 252
  • Evalue 3.60e-64
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 195.0
  • Bit_score: 118
  • Evalue 1.70e-24

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Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGGAGCCATCCGATGAGGTGCTGTGTCAGCGCGTGGCCGGGGGAGAGGAAGCCGCCTTCGATCTCCTGGTCACGCGCTACCAGAAGCGGGCGTGGCGGCTGGCCTGGAACGTCCTGCGTGACGCCGAGGAGGCGCGCGACGCCAGCCAGGAAGCGTTCGTCCGCCTGTACCGTGCCGCGGGCCAGTTCGGTGGCCGCGCCAAGTTCTCCACGTGGTTCTACCGAGTGCTCGTCAACGTGTGCCTGGAACACCGCCGCAAGCACCGCTGGTGGCGCCACATCTTCACGTCGGCGGCCGCTGATGCCTCCGCCGCCAGTGACGATGACGAGGGGTCGTCGGTCGAGCGCCACCCGTCGCCAGCCGTCGACGTGCTCGGCATGATCGGCCGGGAGCAGACCCTGACACGCGTGCAGGCGGCCATGGACCGGCTCTCCCCGCAGCAGCGGGCCGCGCTCACGCTGCAGCTCGACGACGTGCCCACGGCCGAGATCGCCGAAGCGCTGCGCTGCTCCGAGGCGACCGTGCGCGTGCACCTGCATCGCGCGTTGACGACCCTGCGCAAAATCGCGGAGAACGCCTGA
PROTEIN sequence
Length: 194
VEPSDEVLCQRVAGGEEAAFDLLVTRYQKRAWRLAWNVLRDAEEARDASQEAFVRLYRAAGQFGGRAKFSTWFYRVLVNVCLEHRRKHRWWRHIFTSAAADASAASDDDEGSSVERHPSPAVDVLGMIGREQTLTRVQAAMDRLSPQQRAALTLQLDDVPTAEIAEALRCSEATVRVHLHRALTTLRKIAENA*