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13_2_20cm_scaffold_11138

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_11138_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

1..450
DNA (450bp) protein (150aa)
Adenylate/guanylate cyclase id=3389680 bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate/guanylate cyclase Tax=CSP1_5_NC10
adenylate/guanylate cyclase
13_2_20cm_scaffold_11138_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(447..1679)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein id=3526204 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_11138_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1743..3371)
DNA (1629bp) protein (543aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=3526206 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_11138_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3368..3955)
DNA (588bp) protein (196aa)
Uncharacterized protein id=4367554 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_11138_5
unknown

Not on your lists

comp(3955..4155)
DNA (201bp) protein (67aa)

This feature has no annotations

13_2_20cm_scaffold_11138_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4156..4647)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4367556 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_11138_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4649..5230)
DNA (582bp) protein (194aa)
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14627622 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit
13_2_20cm_scaffold_11138_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5240..5557)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627621 bin=bin7_NC10_sister species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_11138_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5704..6870)
DNA (1167bp) protein (389aa)
Peptidase M24 id=4367559 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
peptidase M24 Tax=GWA2_Rokubacteria_73_35_curated
peptidase M24
13_2_20cm_scaffold_11138_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7519..8427)
DNA (909bp) protein (303aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
ParB domain protein nuclease id=4367561 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nuclease
13_2_20cm_scaffold_11138_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8440..9429)
DNA (990bp) protein (330aa)
ABC transporter permease Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease id=4851648 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease
13_2_20cm_scaffold_11138_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9426..10295)
DNA (870bp) protein (290aa)
ABC transporter permease id=3784117 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter permease
13_2_20cm_scaffold_11138_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10292..10987)
DNA (696bp) protein (232aa)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter ATP-binding protein id=3784116 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
13_2_20cm_scaffold_11138_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11124..11792)
DNA (669bp) protein (223aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14627656 bin=bin7_NC10_sister species=Elioraea tepidiphila genus=Elioraea taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein
13_2_20cm_scaffold_11138_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11886..12587)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein id=4851617 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
13_2_20cm_scaffold_11138_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13180..13782)
DNA (603bp) protein (201aa)
Thiol methyltransferase 1-like id=4367562 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus elongatus genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol methyltransferase 1-like protein Tax=GWA2_Rokubacteria_73_35_curated
thiol methyltransferase
13_2_20cm_scaffold_11138_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13770..14384)
DNA (615bp) protein (205aa)
Beta-phosphoglucomutase id=4367563 bin=GWA2_Methylomirabilis_73_35 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD family hydrolase Tax=GWA2_Rokubacteria_73_35_curated
HAD family hydrolase
13_2_20cm_scaffold_11138_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(14424..15053)
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UPF0637 protein HMPREF1013_00496 id=4622868 bin=GWC2_Methylomirabilis_70_24 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_11138_19
unknown

Not on your lists

comp(15270..16019)
DNA (750bp) protein (250aa)

This feature has no annotations

13_2_20cm_scaffold_11138_20
unknown

Not on your lists

comp(16095..16367)
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying 20 items

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