ggKbase home page

13_2_20cm_scaffold_1998_10

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 7355..7867

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 295
  • Evalue 3.50e-77
RNA polymerase sigma factor id=4801469 bin=GWC2_Methylomirabilis_70_16 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 165.0
  • Bit_score: 250
  • Evalue 1.20e-63
ECF subfamily RNA polymerase sigma-24 similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 170.0
  • Bit_score: 153
  • Evalue 4.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCCGACAGCGATTTCCAGCGCCTGGCGCTCTCGCACCTCGATGCGCTCTACAACTTTGCGGTCTATTTGACCCGGAACCCGGCCGAGGCCGAGGATCTAGTGCAAGAAACCTACCTGCGTGCATTCAGGTTCTCCCATCGCTTCCAGCCGGGAACTCACCTCCGGGCCTGGCTGTTTCAAATTTTGAGGAACACTTTTTTGACGTTCTACCGCCTGAGGGAGCGTGAGCTTCCCCTGGCGGAGGACGGCGTGCCCGACTGGGACGCCCCGATGTTCCACGAAGCCCCGGCGGAGGACCCGAGCGTGCTGGAGGCTCACACGGACCTCGAGCGCGCGATGCGGCGCCTCCCGGACGAGTTCCGAACGGTGCTCTTGCTCGCGGAAGTCGAAGGGCTGCCGCTCGAGGAGGTGGCCCAGATTATGGCCTGCCCGGTCGGCACCGTGAAATCGAGGATCTTTCGCGCCAAGGAACGCCTGCGGGTGATCCTGCGCGATTACGAAAAGACATGA
PROTEIN sequence
Length: 171
MADSDFQRLALSHLDALYNFAVYLTRNPAEAEDLVQETYLRAFRFSHRFQPGTHLRAWLFQILRNTFLTFYRLRERELPLAEDGVPDWDAPMFHEAPAEDPSVLEAHTDLERAMRRLPDEFRTVLLLAEVEGLPLEEVAQIMACPVGTVKSRIFRAKERLRVILRDYEKT*