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13_2_20cm_scaffold_1998

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1998_1
unknown

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1..129
DNA (129bp) protein (43aa)

This feature has no annotations

13_2_20cm_scaffold_1998_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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126..1520
DNA (1395bp) protein (465aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Argininosuccinate lyase id=4231026 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
argininosuccinate lyase
13_2_20cm_scaffold_1998_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1517..2578
DNA (1062bp) protein (354aa)
Putative Fibronectin, type III id=2164681 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fibronectin, type III Tax=GWA2_Rokubacteria_73_35_curated
Fibronectin, type III
13_2_20cm_scaffold_1998_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2634..3407)
DNA (774bp) protein (258aa)
Inositol oxygenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK04_9BACT
protein of unknown function DUF706
Uncharacterized protein {ECO:0000313|EMBL:AHG93271.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1998_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3492..4742
DNA (1251bp) protein (417aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10 rbh
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
13_2_20cm_scaffold_1998_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4739..5626
DNA (888bp) protein (296aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase id=4801457 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1998_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5646..6446
DNA (801bp) protein (267aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase id=2164669 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1998_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6470..6802
DNA (333bp) protein (111aa)
dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase id=2164663 bin=GWA2_Methylomirabilis_73_35 species=Streptococcus ictaluri genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1998_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6802..7350
DNA (549bp) protein (183aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=GWA2_Rokubacteria_73_35_cura
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase id=2164593 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
deoxyguanosine kinase/deoxyadenosine kinase subunit
13_2_20cm_scaffold_1998_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7355..7867
DNA (513bp) protein (171aa)
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4801469 bin=GWC2_Methylomirabilis_70_16 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ECF subfamily RNA polymerase sigma-24
13_2_20cm_scaffold_1998_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7864..8292
DNA (429bp) protein (143aa)
id=14627111 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=14627111 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying 11 items

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