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13_2_20cm_scaffold_224_30

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 24038..25141

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 360.0
  • Bit_score: 507
  • Evalue 1.30e-140
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625100 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 355.0
  • Bit_score: 306
  • Evalue 3.00e-80
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1 similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 363.0
  • Bit_score: 225
  • Evalue 3.30e-56

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGCCCAGGGGTTCACGAGCCGGCCACTGGTCGACATCCGCCTCGAGGAGATGCGGACGGCCACGGGAACTCCGCCGTACCTCGAGAGCATCTCGCTCCACGTCCGCTACGGCGAGTTCTTCACGTTCGTGGGGCCGCCGCACTCAGGCAAGACGGCGATCCTCCGGGCCATCGCCGGATTTCTGCCACTCAGCGGTGGCCGCGTGATCGTCGACGCCGAGGACATCGCGCATCTGCCCGCCGCTCGACGCGGGATCGGGTACGTGTTCCATCAGGGCGCGCTGTGGCCGCATCTGGATGCTCGCGCCCACGTGGCCTTCGCTCTCGACCTGGGCGGTGTCGGTCGCGACGACATGGCCGAGCGCATCGAGACCGTGTTGAGGCGGCTCGGTCTGACCGATGTCGCCGGCCGCAAGCCCGACGACCTGACGCTCGAGCAGCGCCGGCGCCTCGCGCTGGCCCGCGCGCTCGCCGTCGAGCCCCGGGTCCTGCTGCTGGACGAACCGTTGGCCCACCTCGATCCGGGCGCGCGCAAGACCCTGCGGCTCGAGGTGGCCCGGCTGCATCGGGACCTCGCGGTGACGACGATCTGTGCGACGCGGGACGCCGCCGACGCCCTCGCGCTCTCGGACCGTATCGGCGTCGTCGAGAACGGCCGGCTCCTGCAGGTTGGTGATCCCGAGCAGCTCTACCGTCGTCCGGCCAGCCACGCCGTCGCCCAGGCGCTCGGGCCGGCAAACTATCTGCCCGTGAAGGTGGTGGAAGTTCGTGAGATCGGCGTCGTCGTCGCGACGGAGGCGGGAGACCGGGTACCGGTGGCTGGAATCGGCGCCTTTCGCCAGGGCACCCCGGGCGTCCTCGTCCTGCGGCCGGAGACGTTGTCGATCGTCGACGCCGCCATGGCCCGCGGCCCGAGCATTCCAGGAACCGTCAGTCTTCGCGTCTTCGAGGGCGCGCGCTATCTCTACGAGATCGACATCCGCACCGGCACGCCGGTCCGCGTGGAGTTGCCGGCGACCGACACGGCCATCTTCCGGGTCGGTGACCGCGTCCGGGTCGAAGTCTCTTCCGACACCGTTGTCCTGCTGCCCGCCGACACCTGA
PROTEIN sequence
Length: 368
MAQGFTSRPLVDIRLEEMRTATGTPPYLESISLHVRYGEFFTFVGPPHSGKTAILRAIAGFLPLSGGRVIVDAEDIAHLPAARRGIGYVFHQGALWPHLDARAHVAFALDLGGVGRDDMAERIETVLRRLGLTDVAGRKPDDLTLEQRRRLALARALAVEPRVLLLDEPLAHLDPGARKTLRLEVARLHRDLAVTTICATRDAADALALSDRIGVVENGRLLQVGDPEQLYRRPASHAVAQALGPANYLPVKVVEVREIGVVVATEAGDRVPVAGIGAFRQGTPGVLVLRPETLSIVDAAMARGPSIPGTVSLRVFEGARYLYEIDIRTGTPVRVELPATDTAIFRVGDRVRVEVSSDTVVLLPADT*