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13_2_20cm_scaffold_253_27

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(27881..29110)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 404.0
  • Bit_score: 420
  • Evalue 3.00e-114
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 401.0
  • Bit_score: 418
  • Evalue 8.00e-114
Extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 409.0
  • Bit_score: 336
  • Evalue 8.60e-90

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Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAATCGCCGCTCGTTCCTCACGGGCTCACTCTCGCTCGCCGCTCTGCCGCTGGCTCGCCCGGCCGCCGCCGCCGAGTCGATTCGCGTCGGCTACCTCGGGCCGCAGACCGGCATCTTCGCCCAGGCCGGCAAGGACATGCTCGACGGGTTGAAGCTGGCCTTCGAGCAGGTCAACTACCAGGCCGGTGGTCGCAAGGTCGAGTTGATCGAGGAGGACACCGAGGGCAATCCGGCCACGGCCCAGGCGAAGTACCGCAAGCTCGTGCAGCAGGACAAGATCCACGTCCTGACCGGCGTCCTGCTCTCGAACATCGGCTACGCGCTCGTGCAACCGATCGAGCGTGACACGCTGCCGGCGCTCTTCTTGACGACGCCCGACGATCTGACCAAGCGCAAGCTCACCAAGTGGATCCTGCGCACGAACTTCAGCGCGAGCCAGCCGATGCACGCCCTCGGCGACTACGCGGCCAAGACCCTCAAGTACCGGCGCGTGGCCGTCGTCGCCATGGACAATCCCTTCGGCCACGAGTGCAGCGGCGGCTTCCAGCGCGTCTTCGAGGACGCGGGCGGACGCGTCGTCCAGAAGATCTGGGTACCGCTCAACGCGCTCGACTTCGCGCCGTATCTGACCCAGCTCCCCCGTGACATCGACGCGGTCGTGCAGGTCTTCGTCGCCGCCCAGGCGGTGCGCTTCGCCAAGCAGTACGCCGAGCAGGGGCTCAAGGAGCGCCTGCCGCTGATCGGGATCGGCGTCTTCACGGACGAGTCGGCCCTCCGCTCGATGGGGGACGAGGCGATCGGCATCGTGACGTCGCTCATCTGGGCGCCGACGCTCCCGACTCCGGCCAACCAGACCTTCATGAAGCTGGCGGAGGCCAAGGGCAAGAACCCGCCCGCGTACTTCACCGCGGTCATGTACAGCGCCGGCCGCTGGATCAGCGCGGCCGCGAACGCGCTCGAGGGCCAGGTCGAAGACCGCGCACGCTTCCTGGCCGCGATCCGCCGGGCGAGCGAGACCACGCCGGATCCGCGAGGGCCCATCACGCTCGACGAGTACGGCAATCCCACGCAGAACGTCTACATCCTGAAGGTCGAGCGCGTTGGTGGAAAGCTTCAGAACACCGTAATCCACACCTACCCGATGGTGTCGCAGTTCTGGACGTACAAGCCCGACGAGTTCCTCAAGTTGCCGGCCTACGACCGCAACTACCCTCCGGCAAAACCGTGA
PROTEIN sequence
Length: 410
MNRRSFLTGSLSLAALPLARPAAAAESIRVGYLGPQTGIFAQAGKDMLDGLKLAFEQVNYQAGGRKVELIEEDTEGNPATAQAKYRKLVQQDKIHVLTGVLLSNIGYALVQPIERDTLPALFLTTPDDLTKRKLTKWILRTNFSASQPMHALGDYAAKTLKYRRVAVVAMDNPFGHECSGGFQRVFEDAGGRVVQKIWVPLNALDFAPYLTQLPRDIDAVVQVFVAAQAVRFAKQYAEQGLKERLPLIGIGVFTDESALRSMGDEAIGIVTSLIWAPTLPTPANQTFMKLAEAKGKNPPAYFTAVMYSAGRWISAAANALEGQVEDRARFLAAIRRASETTPDPRGPITLDEYGNPTQNVYILKVERVGGKLQNTVIHTYPMVSQFWTYKPDEFLKLPAYDRNYPPAKP*