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13_2_20cm_2_scaffold_2030

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2030_1
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..2004)
-----------------
DNA (2004bp)
protein (668aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035EBC5A
Mo-co oxidoreductase dimerization domain protein {ECO:0000313|EMBL:EIC28176.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium
hypothetical protein
13_2_20cm_2_scaffold_2030_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2963..6085)
-----------------
DNA (3123bp)
protein (1041aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85585.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_2_scaffold_2030_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6389..7687
-----------------
DNA (1299bp)
protein (433aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB3_SOLUE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABJ82959.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
13_2_20cm_2_scaffold_2030_4
unknown

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7859..8227
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

13_2_20cm_2_scaffold_2030_5
Corynebacterium striatum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8342..9454)
-----------------
DNA (1113bp)
protein (371aa)
Surface protein A n=5 Tax=Streptococcus pneumoniae RepID=D9NIE5_STREE
Cysteine-rich domain protein {ECO:0000313|EMBL:EEI77598.1}; TaxID=525268 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium striatum A
hypothetical protein
13_2_20cm_2_scaffold_2030_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(9710..10225)
-----------------
DNA (516bp)
protein (172aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFV3_SINAD
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGA27735.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source=
13_2_20cm_2_scaffold_2030_7

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10405..10821
-----------------
DNA (417bp)
protein (139aa)
putative triacylglycerol lipase (EC:3.3.2.10)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=G3CRC8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:AEM45111.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
13_2_20cm_2_scaffold_2030_8

Not on your lists

10839..11279
-----------------
DNA (441bp)
protein (147aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=G3CRC8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:AEM45111.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative alpha/beta hydrolase
13_2_20cm_2_scaffold_2030_9
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11299..13440)
-----------------
DNA (2142bp)
protein (714aa)
adh; alcohol dehydrogenase (EC:1.1.2.8)
Alcohol dehydrogenase [cytochrome c] n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YKK4_9ALTE rbh
Alcohol dehydrogenase [cytochrome c] {ECO:0000313|EMBL:GAC18707.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Pa
13_2_20cm_2_scaffold_2030_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13474..13923)
-----------------
DNA (450bp)
protein (150aa)
DoxX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQC7_KORVE
DoxX protein
DoxX {ECO:0000313|EMBL:ABF40923.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_2030_11
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14078..14749)
-----------------
DNA (672bp)
protein (224aa)
thiopurine S-methyltransferase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483D48
tpm; thiopurine S-methyltransferase Tax=RBG_16_Deltaproteobacteria_44_11_curated
tpm; thiopurine S-methyltransferase
13_2_20cm_2_scaffold_2030_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14906..15328
-----------------
DNA (423bp)
protein (141aa)
Tax=RBG_16_Acidobacteria_70_10_curated
13_2_20cm_2_scaffold_2030_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15495..17180)
-----------------
DNA (1686bp)
protein (562aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371A1F8
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ACY48622.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
13_2_20cm_2_scaffold_2030_14
Acidobacteriaceae bacterium KBS 96, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17322..17969
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E4345
13_2_20cm_2_scaffold_2030_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17980..18915
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA79_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEF63420.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
13_2_20cm_2_scaffold_2030_16
unknown

Not on your lists

comp(18967..19353)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

13_2_20cm_2_scaffold_2030_trna_1
unknown

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comp(19287..19359)
-----------------
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_2030_17
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19514..20401)
-----------------
DNA (888bp)
protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWD9_GRAMM rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEU37742.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis
13_2_20cm_2_scaffold_2030_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20527..22023
-----------------
DNA (1497bp)
protein (499aa)
catalase related subgroup domain-containing protein; K03781 catalase [EC:1.11.1.6] Tax=RBG_16_Gamma2_65_34_curated
catalase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B62B18
catalase
13_2_20cm_2_scaffold_2030_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22067..22876)
-----------------
DNA (810bp)
protein (270aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II82_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43418.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_2_scaffold_2030_20
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

Not on your lists

22916..24349
-----------------
DNA (1434bp)
protein (478aa)
beta-Casp domain-containing protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039C7547
Beta-lactamase domain protein Tax=MPI_Marinimicrobia_46_47
beta-lactamase domain-containing protein
13_2_20cm_2_scaffold_2030_21
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(24606..25019)
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q7_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_2_scaffold_2030_22
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(25068..26288)
-----------------
DNA (1221bp)
protein (407aa)
aminotransferase (EC:2.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q6_SOLUE
13_2_20cm_2_scaffold_2030_23
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26386..26643)
-----------------
DNA (258bp)
protein (86aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZHK0_TERRK
lytic murein transglycosylase
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:AFL88718.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;"
Displaying 24 items

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