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13_2_20cm_2_scaffold_3144

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3144_1
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(183..2159)
-----------------
DNA (1977bp)
protein (659aa)
HD domain protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ30_SYNAS rbh
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ABC76110.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus
13_2_20cm_2_scaffold_3144_2
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(2478..2774)
-----------------
DNA (297bp)
protein (99aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
13_2_20cm_2_scaffold_3144_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2888..4384)
-----------------
DNA (1497bp)
protein (499aa)
nuoN; NADH-quinone oxidoreductase membrane subunit N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoN; NADH-quinone oxidoreductase membrane subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9U8_9BACT rbh
13_2_20cm_2_scaffold_3144_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4381..6042)
-----------------
DNA (1662bp)
protein (554aa)
nuoM2; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoM2; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase, membrane subunit M n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9U9_9BACT rbh
13_2_20cm_2_scaffold_3144_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6147..7775)
-----------------
DNA (1629bp)
protein (543aa)
nuoM1; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoM1; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase, membrane subunit M n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V0_9BACT rbh
13_2_20cm_2_scaffold_3144_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7911..9887)
-----------------
DNA (1977bp)
protein (659aa)
nuoL; NADH-quinone oxidoreductase membrane subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoL; NADH-quinone oxidoreductase membrane subunit L (EC:1.6.99.5)
NADH-quinone oxidoreductase, membrane subunit L n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V1_9BACT
13_2_20cm_2_scaffold_3144_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9912..10214)
-----------------
DNA (303bp)
protein (101aa)
nuoK; NADH-quinone oxidoreductase membrane subunit K (EC:1.6.99.5); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoK; NADH-quinone oxidoreductase membrane subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V2_9BACT
13_2_20cm_2_scaffold_3144_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10304..10831)
-----------------
DNA (528bp)
protein (176aa)
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase, membrane subunit J n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V3_9BACT
13_2_20cm_2_scaffold_3144_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10838..11428)
-----------------
DNA (591bp)
protein (197aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; EC=1.6.99.5 {ECO:0000313|EMBL:CBK40013.1};; NADH dehydrogenase I subunit I {ECO
NADH-quinone oxidoreductase subunit I n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V4_9BACT rbh
13_2_20cm_2_scaffold_3144_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11425..14076)
-----------------
DNA (2652bp)
protein (884aa)
putative NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
putative NADH-quinone oxidoreductase subunit G (EC:1.6.99.5) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Putative NADH-quinone oxidoreductase, subunit G n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V5_9BACT
13_2_20cm_2_scaffold_3144_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14246..15493)
-----------------
DNA (1248bp)
protein (416aa)
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; EC=1.6.99.5 {ECO:0000313|EMBL:CBK40015.1};; NADH dehydrogenase I subunit D {ECO
NADH-quinone oxidoreductase subunit D n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V6_9BACT rbh
13_2_20cm_2_scaffold_3144_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15590..16084)
-----------------
DNA (495bp)
protein (165aa)
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V7_9BACT
13_2_20cm_2_scaffold_3144_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(16201..16716)
-----------------
DNA (516bp)
protein (172aa)
nuoB; NADH-quinone oxidoreductase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
nuoB; NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V8_9BACT
13_2_20cm_2_scaffold_3144_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16854..17237)
-----------------
DNA (384bp)
protein (128aa)
nuoA; NADH-quinone oxidoreductase membrane subunit A (EC:1.6.99.5); K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoA; NADH-quinone oxidoreductase membrane subunit A (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9V9_9BACT
13_2_20cm_2_scaffold_3144_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17862..19247
-----------------
DNA (1386bp)
protein (462aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9W0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_3144_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19385..21619
-----------------
DNA (2235bp)
protein (745aa)
putative primosomal protein N' (EC:3.6.1.-); K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative primosomal protein N' (EC:3.6.1.-)
Putative Primosomal protein N n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9W1_9BACT rbh
13_2_20cm_2_scaffold_3144_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(21634..22026)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9W2_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_2_20cm_2_scaffold_3144_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

22232..22474
-----------------
DNA (243bp)
protein (81aa)
Na+/H+ antiporter n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BJU6_9HELI
Na+/H+-exchanging protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Kef-type K+ transport system membrane protein
13_2_20cm_2_scaffold_3144_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

22486..23292
-----------------
DNA (807bp)
protein (269aa)
Na+/H+-exchanging protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Na+/H+ antiporter id=14626384 bin=bin7_NC10_sister species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=bin7_NC10_sister organism_group=NC10
Na+/H+-exchanging protein
13_2_20cm_2_scaffold_3144_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23380..25434
-----------------
DNA (2055bp)
protein (685aa)
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB id=4127352 bin=GWF2_Nitrospirae_44_13 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_2_20cm_2_scaffold_3144_21
unknown

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25641..25772
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

Displaying 21 items

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