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13_2_20cm_2_scaffold_6365

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_6365_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..942)
-----------------
DNA (942bp)
protein (314aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A42DB
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
13_2_20cm_2_scaffold_6365_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(942..2135)
-----------------
DNA (1194bp)
protein (398aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
aminotransferase class I and II
13_2_20cm_2_scaffold_6365_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2132..3166)
-----------------
DNA (1035bp)
protein (345aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=GWC2_Gemmatimonadetes_71_10_curated
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein
13_2_20cm_2_scaffold_6365_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3203..3817)
-----------------
DNA (615bp)
protein (205aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative oxidoreductase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GKS8_9ACTO
short-chain dehydrogenase/reductase SDR
13_2_20cm_2_scaffold_6365_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3814..6321)
-----------------
DNA (2508bp)
protein (836aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD
formate dehydrogenase subunit alpha
13_2_20cm_2_scaffold_6365_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6318..6599)
-----------------
DNA (282bp)
protein (94aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B67C9E
NADH dehydrogenase subunit G
13_2_20cm_2_scaffold_6365_7
unknown

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comp(6636..6803)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

13_2_20cm_2_scaffold_6365_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6895..7761)
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_6365_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7755..8633)
-----------------
DNA (879bp)
protein (293aa)
Cation diffusion facilitator family transporter n=2 Tax=Synechococcus elongatus RepID=Q31LQ0_SYNE7
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation efflux system protein
13_2_20cm_2_scaffold_6365_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8713..9000
-----------------
DNA (288bp)
protein (96aa)
Putative transcriptional regulator n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMZ1_9FIRM
ArsR; transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative transcriptional regulator
13_2_20cm_2_scaffold_6365_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8993..9637
-----------------
DNA (645bp)
protein (215aa)
Uncharacterized protein n=2 Tax=Geobacillus RepID=E3ICG3_GEOS0
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_6365_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9624..10589
-----------------
DNA (966bp)
protein (322aa)
Lysophospholipase n=1 Tax=Pseudomonas sp. GM49 RepID=J3B2K6_9PSED
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alpha/beta hydrolase
13_2_20cm_2_scaffold_6365_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10623..11777)
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_2_20cm_2_scaffold_6365_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(11774..12142)
-----------------
DNA (369bp)
protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=RBG_16_Chloroflexi_63_12_curated
aroH; chorismate mutase (EC:5.4.99.5)
monofunctional chorismate mutase, clade 1 id=24447245 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_2_20cm_2_scaffold_6365_15
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12337..12651
-----------------
DNA (315bp)
protein (105aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Desmospora sp. 8437 RepID=F5SA76_9BACL
13_2_20cm_2_scaffold_6365_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12675..13640)
-----------------
DNA (966bp)
protein (322aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_6365_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13645..14088)
-----------------
DNA (444bp)
protein (148aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_2_20cm_2_scaffold_6365_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14085..15344)
-----------------
DNA (1260bp)
protein (420aa)
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
Transcription termination factor Rho id=1249870 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_2_20cm_2_scaffold_6365_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15571..16458
-----------------
DNA (888bp)
protein (296aa)
Putative membrane-associated Zn-dependent protease n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCK7_DESTA
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative membrane-associated Zn-dependent protease
13_2_20cm_2_scaffold_6365_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16527..16811
-----------------
DNA (285bp)
protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_6365_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16811..16996
-----------------
DNA (186bp)
protein (62aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_6365_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17289..18425
-----------------
DNA (1137bp)
protein (379aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_6365_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18422..19537
-----------------
DNA (1116bp)
protein (372aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_6365_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(19512..20375)
-----------------
DNA (864bp)
protein (288aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036FB1E2
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEP11184.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (st
13_2_20cm_2_scaffold_6365_25
unknown

Not on your lists

20983..21771
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

13_2_20cm_2_scaffold_6365_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21855..23354
-----------------
DNA (1500bp)
protein (500aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_6365_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23421..24377
-----------------
DNA (957bp)
protein (319aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATPase n=2 Tax=Streptomyces bottropensis RepID=M3ENW7_9ACTO
ATPase associated with various cellular activities AAA_3
13_2_20cm_2_scaffold_6365_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24374..25687
-----------------
DNA (1314bp)
protein (438aa)
Putative conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) id=1866192 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein of unknown function DUF58
13_2_20cm_2_scaffold_6365_29
unknown

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25754..26566
-----------------
DNA (813bp)
protein (271aa)

This feature has no annotations

13_2_20cm_2_scaffold_6365_30
unknown

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26682..27341
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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