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13_1_40cm_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_152_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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66..806
DNA (741bp) protein (247aa)
hypothetical protein id=14427274 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_152_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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850..1407
DNA (558bp) protein (186aa)
hypothetical protein id=14427275 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_152_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1412..2935
DNA (1524bp) protein (508aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO
guaA; GMP synthetase (glutamine aminotransferase) (EC:6.3.5.2)
GMP synthase (Glutamine-hydrolyzing) (Glutamine amidotransferase) (GMP synthetase) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQS5_9ARCH
13_1_40cm_scaffold_152_4
unknown

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3015..3233
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_152_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3603..5033)
DNA (1431bp) protein (477aa)
M36 family peptidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U9T7_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFA94197.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
M36 family peptidase
13_1_40cm_scaffold_152_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5103..6125)
DNA (1023bp) protein (341aa)
pfkB family carbohydrate kinase (EC:2.7.1.-)
PfkB family carbohydrate kinase {ECO:0000313|EMBL:AFU59937.1}; EC=2.7.1.- {ECO:0000313|EMBL:AFU59937.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
PfkB family carbohydrate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM29_NITGG
13_1_40cm_scaffold_152_7
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6134..7765)
DNA (1632bp) protein (544aa)
Thermosome n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8V4_9ARCH
thermosome
Thermosome {ECO:0000313|EMBL:AFS81572.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
13_1_40cm_scaffold_152_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7808..9580)
DNA (1773bp) protein (591aa)
ade; Adenine deaminase (EC:3.5.4.2)
adenine deaminase id=14427280 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
adenine deaminase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_152_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9648..9926
DNA (279bp) protein (93aa)
50S ribosomal protein L44E n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR66_9ARCH
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ribosomal protein L44E
13_1_40cm_scaffold_152_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9926..10123
DNA (198bp) protein (66aa)
30S ribosomal protein S27E id=14427282 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
30S ribosomal protein S27E Tax=CSP1_1_Thaumarchaeota
30S ribosomal protein S27E
13_1_40cm_scaffold_152_11

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comp(10106..10675)
DNA (570bp) protein (190aa)
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase (IspD) {ECO:0000313|EMBL:AIF07780.1}; EC=2.7.7.60 {ECO:0000313|EMBL:AIF07780.1};; TaxID=1456101 species="Archaea; Thaumarchaeota; environment
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3J11 RepID=B3T7V6_9ARCH
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase
13_1_40cm_scaffold_152_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10687..11412)
DNA (726bp) protein (242aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] id=14427284 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=CSP1_1_Thaumarchaeota
cobS; adenosylcobinamide-GDP ribazoletransferase (EC:2.7.8.26)
13_1_40cm_scaffold_152_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11405..12397)
DNA (993bp) protein (331aa)
cobalamin biosynthesis protein CobD id=14427285 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cobalamin biosynthesis protein CobD Tax=CSP1_1_Thaumarchaeota
cobD; putative cobalamin biosynthesis protein CobD
13_1_40cm_scaffold_152_14

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comp(12394..13239)
DNA (846bp) protein (282aa)
Probable cobyric acid synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5V7_9ARCH
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote S
cobyrinic acid ac-diamide synthase
13_1_40cm_scaffold_152_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13236..14312)
DNA (1077bp) protein (359aa)
class I/II aminotransferase id=14427287 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
class I/II aminotransferase Tax=CSP1_1_Thaumarchaeota
class I/II aminotransferase
13_1_40cm_scaffold_152_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14398..15474
DNA (1077bp) protein (359aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase id=14427288 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
aspartate-semialdehyde dehydrogenase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_152_17
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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15547..16005
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYR1_9ARCH
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGP94455.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candida
putative HTH-type transcriptional regulator LrpA
13_1_40cm_scaffold_152_18
uncultured marine crenarchaeote HF4000_APKG8D6, Nitrosopumilales, Thaumarchaeota, Archaea

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16059..16964
DNA (906bp) protein (302aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA87_9ARCH
13_1_40cm_scaffold_152_19

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comp(16972..18306)
DNA (1335bp) protein (445aa)
ubiD; UbiD family decarboxylase (EC:4.1.1.-)
Uncharacterized protein {ECO:0000313|EMBL:KKM00655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
UbiD family decarboxylase id=14427298 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_scaffold_152_20

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comp(18306..18641)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF07766.1}; TaxID=1456101 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_24_H04.;"
hypothetical protein id=14427299 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_scaffold_152_21

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comp(18659..18895)
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM00653.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein id=14427300 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_scaffold_152_22
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(19137..19751)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUA2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06401.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_scaffold_152_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19853..20191)
DNA (339bp) protein (113aa)
ubiquitin-associated domain-containing protein; K03626 nascent polypeptide-associated complex subunit alpha id=14427303 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ubiquitin-associated domain-containing protein; K03626 nascent polypeptide-associated complex subunit alpha Tax=CSP1_1_Thaumarchaeota
nac; Nascent polypeptide-associated complex protein
13_1_40cm_scaffold_152_24
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(20210..20500)
DNA (291bp) protein (97aa)
PUA domain-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLI0_9ARCH
PUA domain-containing protein {ECO:0000313|EMBL:EGG41744.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitros
PUA domain-containing protein
13_1_40cm_scaffold_152_25
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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20772..21815
DNA (1044bp) protein (348aa)
Phosphate uptake regulator PhoU n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5X7_9ARCH
phosphate uptake regulator PhoU
Phosphate uptake regulator PhoU {ECO:0000313|EMBL:AFS81598.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
13_1_40cm_scaffold_152_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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21827..22969
DNA (1143bp) protein (381aa)
GTP1/OBG protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR25_9ARCH
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thauma
GTP1/OBG protein
13_1_40cm_scaffold_152_27

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22959..23489
DNA (531bp) protein (177aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA72_9ARCH
hypothetical protein
13_1_40cm_scaffold_152_28
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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23517..24026
DNA (510bp) protein (170aa)
Transcription factor E n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQW9_9ARCH
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
tfe; Transcription factor E
13_1_40cm_scaffold_152_29

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comp(24023..24673)
DNA (651bp) protein (217aa)
Deaminase-reductase domain-containing protein (RIB7, arfC) {ECO:0000313|EMBL:AIF08622.1}; EC=1.1.1.302 {ECO:0000313|EMBL:AIF08622.1};; TaxID=1456121 species="Archaea; Thaumarchaeota; environmental sam
Diaminohydroxyphosphoribosylaminopyrimidine reductase (EC:1.1.1.-)
Deaminase-reductase domain-containing protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEQ6_9ARCH
13_1_40cm_scaffold_152_30
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(24660..25847)
DNA (1188bp) protein (396aa)
5-methylthioadenosine-S-adenosylhomocysteine deaminase protein {ECO:0000313|EMBL:KFM17594.1}; EC=3.5.4.1 {ECO:0000313|EMBL:KFM17594.1};; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Th
Amidohydrolase family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0R8_9ARCH
Amidohydrolase
Displaying items 1-30 of 42 in total

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