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13_1_40cm_scaffold_2997

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2997_1
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2..598
DNA (597bp) protein (199aa)
phospho-2-dehydro-3-deoxyheptonate aldolase id=14428511 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_40cm_scaffold_2997_2

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585..1580
DNA (996bp) protein (332aa)
aroB; 3-dehydroquinate synthase (EC:1.4.1.24)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVK5_9ARCH
13_1_40cm_scaffold_2997_3

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comp(1974..2177)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATY2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF22889.1}; TaxID=1456376 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_10_H08.;"
hypothetical protein
13_1_40cm_scaffold_2997_4
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(2236..3081)
DNA (846bp) protein (282aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" so
Putative DNA methylase N-4/N-6 domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB54_NITGG
putative DNA methylase N-4/N-6 domain protein
13_1_40cm_scaffold_2997_5

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comp(3204..3581)
DNA (378bp) protein (126aa)
DNA-binding protein n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037804A2
albA; DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=1502292 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCG
13_1_40cm_scaffold_2997_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3664..4344
DNA (681bp) protein (227aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=14428509 bin=bin2_Thaum tax=bin2_Thaum organism_group=Archaeon
3-dehydroquinate dehydratase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_2997_7
unknown

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4419..4700
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_2997_8

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4761..5582
DNA (822bp) protein (274aa)
Shikimate dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQJ2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM24087.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
shikimate 5-dehydrogenase
13_1_40cm_scaffold_2997_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5585..6436
DNA (852bp) protein (284aa)
aroK; Shikimate kinase (EC:2.7.1.71)
shikimate kinase id=14428506 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
shikimate kinase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_2997_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6426..7691
DNA (1266bp) protein (422aa)
3-phosphoshikimate 1-carboxyvinyltransferase id=14428505 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
3-phosphoshikimate 1-carboxyvinyltransferase Tax=CSP1_1_Thaumarchaeota
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_40cm_scaffold_2997_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(7707..8390)
DNA (684bp) protein (228aa)
Putative GCN5-related N-acetyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU1_9ARCH
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDI06707.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
histone acetyltransferase
Displaying 11 items

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