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13_1_40cm_scaffold_3220

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3220_1

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3..983
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003666034
Translation-associated GTPase {ECO:0000313|EMBL:AIF07068.1}; TaxID=1456091 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_199_D03.;"
translation-associated GTPase
13_1_40cm_scaffold_3220_2

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985..1968
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL46923.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metalloendopeptidase glycoprotease family protein id=14427222 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
metalloendopeptidase glycoprotease family protein
13_1_40cm_scaffold_3220_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1965..2261)
DNA (297bp) protein (99aa)
hypothetical protein id=14427221 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_3220_4
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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2372..3016
DNA (645bp) protein (215aa)
Kae1-associated kinase Bud32 (EC:2.7.-.-)
Kae1-associated kinase Bud32 {ECO:0000313|EMBL:AJA92023.1}; EC=2.7.-.- {ECO:0000313|EMBL:AJA92023.1};; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus
Mn2+-dependent serine/threonine protein kinase id=14427218 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_scaffold_3220_5
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3009..3569
DNA (561bp) protein (187aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7P2_9ARCH
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase {ECO:0000313|EMBL:AFS81524.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="
13_1_40cm_scaffold_3220_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3529..4557)
DNA (1029bp) protein (343aa)
tRNA-modifying protein id=14427216 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
tRNA-modifying protein Tax=CSP1_1_Thaumarchaeota
tRNA-modifying protein
13_1_40cm_scaffold_3220_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4936..5988
DNA (1053bp) protein (351aa)
Zn-dependent alcohol dehydrogenase (EC:1.1.1.1)
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AIF83236.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AIF83236.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitroso
NAD-dependent alcohol dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE04_NITGG
13_1_40cm_scaffold_3220_trna_1
unknown

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6101..6172
DNA (72bp)
transferRNA
13_1_40cm_scaffold_3220_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6175..6522)
DNA (348bp) protein (116aa)
hypothetical protein id=14427198 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_3220_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6562..7335)
DNA (774bp) protein (258aa)
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein id=14427197 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_scaffold_3220_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7361..7645)
DNA (285bp) protein (95aa)
hypothetical protein; K09721 hypothetical protein id=14427196 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein; K09721 hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_3220_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7703..7915)
DNA (213bp) protein (71aa)
Rieske (2Fe-2S) domain-containing protein; K05710 dioxygenase ferredoxin subunit id=14427195 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Rieske (2Fe-2S) domain-containing protein; K05710 dioxygenase ferredoxin subunit Tax=CSP1_1_Thaumarchaeota
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_scaffold_3220_12
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7974..8834)
DNA (861bp) protein (287aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU34_9ARCH
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:EGP93037.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" sour
13_1_40cm_scaffold_3220_13

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comp(8840..10546)
DNA (1707bp) protein (569aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM89958.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glutamyl-tRNA synthetase id=14427192 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glutamyl-tRNA synthetase
13_1_40cm_scaffold_3220_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10547..11551)
DNA (1005bp) protein (335aa)
polyprenyl synthetase id=14427191 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
polyprenyl synthetase Tax=CSP1_1_Thaumarchaeota
polyprenyl synthetase
13_1_40cm_scaffold_3220_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(11530..12168)
DNA (639bp) protein (213aa)
Isopentenyl-diphosphate delta-isomerase, type 1 {ECO:0000313|EMBL:CDI05170.1}; EC=5.3.3.2 {ECO:0000313|EMBL:CDI05170.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;"
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase, type 1 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARL9_9ARCH
13_1_40cm_scaffold_3220_16
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12178..12963)
DNA (786bp) protein (262aa)
Aspartate/glutamate/uridylate kinase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A426_NITMS
Aspartate/glutamate/uridylate kinase
Aspartate/glutamate/uridylate kinase {ECO:0000313|EMBL:AJM91930.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopum
13_1_40cm_scaffold_3220_17
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13054..13704)
DNA (651bp) protein (217aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=88
Mevalonate kinase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KL19_9ARCH
mevalonate kinase
Displaying 18 items

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