ggKbase home page

13_1_40cm_scaffold_638

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_638_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

435..1745
DNA (1311bp) protein (437aa)
hemL; Glutamate-1-semialdehyde 2,1-aminomutase 2 (EC:5.4.3.8)
class III aminotransferase id=14427745 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
class III aminotransferase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_638_2

Not on your lists

1766..2590
DNA (825bp) protein (275aa)
Plastocyanin protein {ECO:0000313|EMBL:KFM18935.1}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11
hypothetical protein
hypothetical protein id=14427746 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_scaffold_638_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2565..3287)
DNA (723bp) protein (241aa)
short-chain dehydrogenase/reductase SDR id=14424859 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR Tax=CSP1_2_Dadabacteria
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_638_4
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3329..4021)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BC21_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82555.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_scaffold_638_5
unknown

Not on your lists

comp(4121..4972)
DNA (852bp) protein (284aa)

This feature has no annotations

13_1_40cm_scaffold_638_6
unknown

Not on your lists

5144..5698
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_scaffold_638_7
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6042..7952
DNA (1911bp) protein (637aa)
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXG8_METBM
Tax=BJP_S1_SUB10_Methanoculleus_61_9
13_1_40cm_scaffold_638_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8007..9134
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG23_NITGG
putative glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:AIC14630.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_scaffold_638_9
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9106..9399
DNA (294bp) protein (98aa)
Glycosyl transferase family protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7G6_9ARCH
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:AFS81112.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumi
13_1_40cm_scaffold_638_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9487..10698
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E1C7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA05100.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
putative quinoprotein glucose/sorbosone dehydrogenase
13_1_40cm_scaffold_638_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10753..11325)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84841.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_scaffold_638_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11457..11711
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60438.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_638_13
unknown

Not on your lists

comp(11713..11829)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_scaffold_638_14
unknown

Not on your lists

comp(11893..12072)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_638_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

12135..12905
DNA (771bp) protein (257aa)
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC17097.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_scaffold_638_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12909..13415)
DNA (507bp) protein (169aa)
Putative thioesterase superfamily protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG13_NITGG
thioesterase superfamily protein
Putative thioesterase superfamily protein {ECO:0000313|EMBL:AFU58725.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
13_1_40cm_scaffold_638_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13832..14245
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE38_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59621.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_638_18
unknown

Not on your lists

comp(14247..14585)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_638_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(14625..15026)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06308.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_scaffold_638_20

Not on your lists

15165..15398
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL11798.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14427880 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_scaffold_638_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15414..15905
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3M9_9ARCH
DedA family protein
DedA family protein {ECO:0000313|EMBL:AIC16209.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera vienn
13_1_40cm_scaffold_638_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

16172..18658
DNA (2487bp) protein (829aa)
peptidase M1 membrane alanine aminopeptidase id=14428343 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peptidase M1 membrane alanine aminopeptidase Tax=CSP1_1_Thaumarchaeota
peptidase family M1
13_1_40cm_scaffold_638_23
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

18704..19204
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3A7_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12536.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_scaffold_638_24
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

19359..20639
DNA (1281bp) protein (427aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNM4_9EURY
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
Na/H antiporter
13_1_40cm_scaffold_638_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

20681..21493
DNA (813bp) protein (271aa)
hypothetical protein id=14427757 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_638_26
unknown

Not on your lists

21495..21815
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_scaffold_638_27
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

22028..23377
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS82_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05395.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_scaffold_638_28
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

23383..23931
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARN1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05396.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_scaffold_638_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24248..24544)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH
putative RNA-binding protein, contains TRAM domain
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_scaffold_638_30
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24688..25782)
DNA (1095bp) protein (365aa)
Putative transmembrane protein n=1 Tax=uncultured crenarchaeote RepID=Q8NKM7_9CREN
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AIF85472.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitroso
Displaying items 1-30 of 43 in total

View Taxonomy