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13_1_40cm_scaffold_678

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_678_1

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2..1045
DNA (1044bp) protein (348aa)
Putative DNA repair and recombination protein radA n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU25_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL94066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
radA; DNA repair and recombination protein RadA
13_1_40cm_scaffold_678_2

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1152..1451
DNA (300bp) protein (100aa)
50S ribosomal protein L21e n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4C6_9ARCH
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Mari
ribosomal protein L21E
13_1_40cm_scaffold_678_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1455..1781
DNA (327bp) protein (109aa)
RNA polymerase Rpb4 id=14427349 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
RNA polymerase Rpb4 Tax=CSP1_1_Thaumarchaeota
RNA polymerase Rpb4
13_1_40cm_scaffold_678_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1801..2361
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EWK6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPA06564.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
13_1_40cm_scaffold_678_5

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2358..3065
DNA (708bp) protein (236aa)
Ribosomal RNA adenine methylase transferase (KsgA) {ECO:0000313|EMBL:AIF11484.1}; EC=2.1.1.182 {ECO:0000313|EMBL:AIF11484.1};; TaxID=1456176 species="Archaea; Thaumarchaeota; environmental samples.;"
ribosomal RNA adenine methylase transferase id=14427347 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ribosomal RNA adenine methylase transferase
13_1_40cm_scaffold_678_6

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3043..3591
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4D0_9ARCH
Methylase {ECO:0000313|EMBL:AIE97920.1}; TaxID=1455960 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_03_D08.;"
Methylase
13_1_40cm_scaffold_678_7
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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3672..4547
DNA (876bp) protein (292aa)
HYR domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E6N5_9ARCH
HYR domain protein {ECO:0000313|EMBL:EPA06850.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum l
hypothetical protein
13_1_40cm_scaffold_678_8

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comp(4548..5585)
DNA (1038bp) protein (346aa)
Isocitrate/isopropylmalate dehydrogenase (IDH1, IDH2, icd) {ECO:0000313|EMBL:AIE98394.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AIE98394.1};; TaxID=1455970 species="Archaea; Thaumarchaeota; environmental samp
isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00035C2D7B
13_1_40cm_scaffold_678_9

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5684..6427
DNA (744bp) protein (248aa)
Metallophosphoesterase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMK1_9ARCH
Metallophosphoesterase {ECO:0000313|EMBL:AIE94884.1}; TaxID=1455924 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_54_E04.;"
Metallophosphoesterase
13_1_40cm_scaffold_678_trna_1
unknown

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6478..6561
DNA (84bp)
transferRNA
13_1_40cm_scaffold_678_10

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6850..7023
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BG62_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07341.1}; TaxID=1456096 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_201_H03.;"
hypothetical protein
13_1_40cm_scaffold_678_11

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comp(7013..7834)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU53_9ARCH
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KFM15434.1}; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarch
hypothetical protein
13_1_40cm_scaffold_678_12
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(7831..9021)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUB9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA93211.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_scaffold_678_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9202..10812)
DNA (1611bp) protein (537aa)
2-alkenal reductase id=14427992 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
2-alkenal reductase Tax=CSP1_1_Thaumarchaeota
2-alkenal reductase
13_1_40cm_scaffold_678_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10925..11749)
DNA (825bp) protein (275aa)
short-chain dehydrogenase/reductase SDR id=14427991 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
short-chain dehydrogenase/reductase SDR Tax=CSP1_1_Thaumarchaeota
PF08643 family protein
13_1_40cm_scaffold_678_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11810..13996)
DNA (2187bp) protein (729aa)
DEAD/DEAH box helicase Tax=CSP1_1_Thaumarchaeota
DEAD/DEAH box helicase id=14427989 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase domain protein
Displaying 16 items

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