ggKbase home page

13_1_40cm_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_87_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3..431)
DNA (429bp) protein (143aa)
fibronectin type III domain-containing protein id=14426984 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
fibronectin type III domain-containing protein Tax=CSP1_1_Thaumarchaeota
fibronectin type III domain-containing protein
13_1_40cm_scaffold_87_2
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

709..1089
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003760C1C
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
13_1_40cm_scaffold_87_3
unknown

Not on your lists

comp(1070..1171)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_scaffold_87_4
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1398..1880)
DNA (483bp) protein (161aa)
hypothetical protein Tax=RBG_13_Planctomycetes_60_9_curated
Heat shock protein Hsp20 id=4434717 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
13_1_40cm_scaffold_87_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2077..3702
DNA (1626bp) protein (542aa)
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I925_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU57796.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaer
13_1_40cm_scaffold_87_6
Glarea lozoyensis, Glarea, Helotiales, Leotiomycetes, Ascomycota, Fungi

Not on your lists

comp(3808..4578)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) RepID=S3CSJ8_GLAL2
Uncharacterized protein {ECO:0000313|EMBL:EPE28049.1}; TaxID=1116229 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea.;" source="Glarea lo
13_1_40cm_scaffold_87_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4783..4992
DNA (210bp) protein (70aa)
Gas vesicle structural protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS3_NITGG
gvpA2; gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_scaffold_87_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5018..5257
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICP2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59136.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_87_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5247..5492
DNA (246bp) protein (82aa)
Gas vesicle structural protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH03_NITGG
gvpJ; gas vesicle protein GvpJ
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_scaffold_87_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5499..5993
DNA (495bp) protein (165aa)
Gas vesicle protein GcpK n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC5_NITGG
gvpK; gas vesicle protein GcpK
Gas vesicle protein GcpK {ECO:0000313|EMBL:AFU59134.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_87_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5983..6720
DNA (738bp) protein (246aa)
Putative gas vesicle synthesis protein GvpL_GvpF n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ47_NITGG
gas vesicle synthesis protein GvpL_GvpF
Putative gas vesicle synthesis protein GvpL_GvpF {ECO:0000313|EMBL:AFU59133.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;
13_1_40cm_scaffold_87_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6951..8045
DNA (1095bp) protein (365aa)
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKI6_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU59788.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaer
13_1_40cm_scaffold_87_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8177..8455
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58353.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_87_14
unknown

Not on your lists

8542..8778
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_87_15
unknown

Not on your lists

8873..9115
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_scaffold_87_16

Not on your lists

comp(9511..10980)
DNA (1470bp) protein (490aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK75314.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_87_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(11201..12244)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS92_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05517.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
fibronectin type III domain-containing protein
13_1_40cm_scaffold_87_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

12369..13442
DNA (1074bp) protein (358aa)
Chitin synthase (Fragment) n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E592_9ARCH
Chitin synthase {ECO:0000313|EMBL:EPA04646.1}; Flags: Fragment;; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Ni
hypothetical protein
13_1_40cm_scaffold_87_19
unknown

Not on your lists

14297..14545
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_scaffold_87_20

Not on your lists

14736..15113
DNA (378bp) protein (126aa)
Putative transcription regulator n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX50_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKM73810.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_87_21
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

15236..15580
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQZ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05009.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_scaffold_87_22
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

16714..17217
DNA (504bp) protein (168aa)
Peptidase S26B, signal peptidase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYX4_9ARCH
Peptidase S26B, signal peptidase {ECO:0000313|EMBL:EGP92942.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Ni
peptidase S26B, signal peptidase
13_1_40cm_scaffold_87_23
unknown

Not on your lists

17323..18735
DNA (1413bp) protein (471aa)

This feature has no annotations

13_1_40cm_scaffold_87_24
unknown

Not on your lists

19181..19720
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_scaffold_87_25
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

19867..20112
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B535_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80559.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_scaffold_87_26

Not on your lists

comp(20504..21121)
DNA (618bp) protein (206aa)
Rieske Fe-S protein (EC:1.10.2.2)
Putative Rieske (2Fe-2S) domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQU8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK82171.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_87_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21146..22228)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58044.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_87_28
Stachybotrys chlorohalonata, Stachybotrys, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(22428..23654)
DNA (1227bp) protein (409aa)
Spherulin 4-like cell surface n=1 Tax=Moniliophthora roreri (strain MCA 2997) RepID=V2X7T4_MONRO
Uncharacterized protein {ECO:0000313|EMBL:KFA60551.1}; TaxID=1283841 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; mitosporic Hypocre
13_1_40cm_scaffold_87_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24168..25604)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH38_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59175.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_87_30
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

26022..27347
DNA (1326bp) protein (442aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14307.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
Displaying items 1-30 of 32 in total

View Taxonomy