ggKbase home page

13_1_40cm_scaffold_99

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_99_1
unknown

Not on your lists

comp(35..502)
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_scaffold_99_2
unknown

Not on your lists

comp(570..698)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_scaffold_99_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

838..1263
DNA (426bp) protein (142aa)
Flavin nucleotide binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV54_9ARCH
Flavin nucleotide binding protein {ECO:0000313|EMBL:CDI06427.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
flavin nucleotide binding protein
13_1_40cm_scaffold_99_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(1351..2694)
DNA (1344bp) protein (448aa)
Putative Histidine kinase {ECO:0000313|EMBL:CDI05323.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDI05323.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeo
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Putative Histidine kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASB6_9ARCH
13_1_40cm_scaffold_99_5
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

3243..4697
DNA (1455bp) protein (485aa)
Chitin synthase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4T5_9ARCH
Chitin synthase {ECO:0000313|EMBL:EIJ66728.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria BD31.;"
Chitin synthase
13_1_40cm_scaffold_99_6
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

4694..6610
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4U6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EIJ66739.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria B
hypothetical protein
13_1_40cm_scaffold_99_7
uncultured crenarchaeote 57a5, Crenarchaeota, Archaea

Not on your lists

6749..7021
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=uncultured crenarchaeote 57a5 RepID=D4N726_9CREN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24512.1}; TaxID=684058 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 57a5.;"
13_1_40cm_scaffold_99_8

Not on your lists

comp(7267..7872)
DNA (606bp) protein (202aa)
Nitroreductase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANY8_PELPD
nitroreductase
Nitroreductase {ECO:0000313|EMBL:KHO51080.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
13_1_40cm_scaffold_99_9
unknown

Not on your lists

8145..8270
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_99_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8267..9130)
DNA (864bp) protein (288aa)
transcriptional regulator TrmB id=14428555 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
transcriptional regulator TrmB Tax=CSP1_1_Thaumarchaeota
transcriptional regulator TrmB
13_1_40cm_scaffold_99_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9353..9577
DNA (225bp) protein (75aa)
hypothetical protein id=14427543 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_99_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9612..10115)
DNA (504bp) protein (168aa)
hypothetical protein id=14427155 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_99_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

10435..11778
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASQ9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05488.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_scaffold_99_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11969..12319)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEG2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83728.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_scaffold_99_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(12421..12792)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVT1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06703.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_scaffold_99_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

13250..14065
DNA (816bp) protein (272aa)
alpha/beta hydrolase id=14428447 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
alpha/beta hydrolase Tax=CSP1_1_Thaumarchaeota
Alpha/beta hydrolase
13_1_40cm_scaffold_99_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

14098..14517
DNA (420bp) protein (140aa)
AbrB family transcriptional regulator id=14428446 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
AbrB family transcriptional regulator Tax=CSP1_1_Thaumarchaeota
AbrB family transcriptional regulator
13_1_40cm_scaffold_99_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

14514..14933
DNA (420bp) protein (140aa)
hypothetical protein id=14428445 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_99_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14952..16022)
DNA (1071bp) protein (357aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14428444 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
poly(R)-hydroxyalkanoic acid synthase subunit PhaC Tax=CSP1_1_Thaumarchaeota
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC
13_1_40cm_scaffold_99_20
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(16012..16590)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037B2F4F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJM92370.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.
13_1_40cm_scaffold_99_21
unknown

Not on your lists

16691..16924
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_99_22
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

16975..18216
DNA (1242bp) protein (414aa)
Putative PKD domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYL9_9ARCH
Putative PKD domain protein {ECO:0000313|EMBL:EGP94413.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitroso
conserved exported protein of unknown function
13_1_40cm_scaffold_99_23
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(18291..19826)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS92_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05517.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
VCBS repeat-containing protein
13_1_40cm_scaffold_99_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(19959..20420)
DNA (462bp) protein (154aa)
pyridoxamine 5'-phosphate oxidase id=14428367 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
pyridoxamine 5'-phosphate oxidase Tax=CSP1_1_Thaumarchaeota
putative Pyridoxamine 5'-phosphate oxidase
13_1_40cm_scaffold_99_25
unknown

Not on your lists

comp(20454..21626)
DNA (1173bp) protein (391aa)

This feature has no annotations

13_1_40cm_scaffold_99_26
unknown

Not on your lists

comp(21623..22417)
DNA (795bp) protein (265aa)

This feature has no annotations

13_1_40cm_scaffold_99_27
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

22889..23545
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVA8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06423.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
conserved exported protein of unknown function
13_1_40cm_scaffold_99_28
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(23662..24318)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8S0_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80851.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_scaffold_99_29
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(24458..26110)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS92_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05517.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Fibronectin type III domain-containing protein
Displaying 29 items

View Taxonomy