ggKbase home page

13_1_40cm_scaffold_638_32

Organism: 13_1_40CM_Thaumarchaeota_38_12

near complete RP 29 / 55 MC: 2 BSCG 11 / 51 ASCG 32 / 38
Location: 27442..28641

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=14427904 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 401.0
  • Bit_score: 480
  • Evalue 1.30e-132
tRNA pseudouridine synthase TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 400.0
  • Bit_score: 480
  • Evalue 2.30e-132
tRNA pseudouridine synthase TruD similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 399.0
  • Bit_score: 477
  • Evalue 4.00e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1200
GTGGTTCCTAAATTAGATAATCTAATCGGAATTTCTATCTACTGTACAAGAACAGAAGGAACTGGCGGCAAAATAAGATCTTTGCCTGATCAATTCTTTGTTTCAGAGATACTTCGTGAAAATACCCTTTCAAAGATATCTAATTCAGGAATCTATACAGTATACAAATTGAAAAAATCTGGAATTGATACAAATCATGCATTATCTGAGATTTTCAAAAGATATGGCCTAAGACTCAAAGCATTAGGACTAAAGGATGCAAATGCTACTACTGAACAATACGTCTGTGATATGAGTACAGGTAGAGGAATTGGAAACATAGAGACAAACAGATATGCCCTTGAAAAAATCGGGTTTGTACAAAAACCACTTACAAAAAGAGATATGATTGGAAATAATTTTAGGATTAAAATAGAGGATTCCAATTTTACAAAGATTTCAGATTTCAAAGAACAACACTCGATTCTCAATTTTTATGGCTACCAGAGATTTGGGAGTAGGAGACCAATTTCTCATCTTATTGGAAAAGCAATCTTACAAAAAAATTTTGATTATGCTATAGAAGTTCTTCTCTCTACCAGTTCTGAATATGACCTGCAAGAAAACAAAAAGATAAGAGACATGCTCAAGGATAAATCAAATTATTCAAAAATGCTTACCGAGGTTCCACCACAAATGGATATTGAGAGACTTGTACTCAAAGAGATCATAGATCATGGAGATGCAAAGCGGGCGTTACGAGCAATACATCTTCCTTTGAGGAGATTTTTTGTAGAAGCATTTAAGTCATATATCTTCAATCGAACGATCTCTAAGGCATATGAGTACAGAGAGGAGTTATTGAGGCCAGAAGAAGATGACGTCTGTTATGACAAAGATGACAATCTTGGCAGATATCAAAATGATCCTCAACAAAGGTTAGCAATTCCACTTGTAGGTTACTCGTATTCAAAAAAGAACAGGTTTAATCAGGATATTTCACAAATCCTAGACGAAGAACAAGTTAGCCCAAAGGACTTTTTTGTCAAAGAAATGCAGGAGGTAAGTGACGAGGGTGGATTTAGACAAGCGGCTATACAATGCCGTGATTTTTCCATTAGTGAGCCATATCTTAGTTTCACGCTTTCAAGAGGTTCTTATGCAACAATTCTTTTGAGGGAGATCATAAAACCAATGGATCCTATAACAGCTGGATTCTAA
PROTEIN sequence
Length: 400
VVPKLDNLIGISIYCTRTEGTGGKIRSLPDQFFVSEILRENTLSKISNSGIYTVYKLKKSGIDTNHALSEIFKRYGLRLKALGLKDANATTEQYVCDMSTGRGIGNIETNRYALEKIGFVQKPLTKRDMIGNNFRIKIEDSNFTKISDFKEQHSILNFYGYQRFGSRRPISHLIGKAILQKNFDYAIEVLLSTSSEYDLQENKKIRDMLKDKSNYSKMLTEVPPQMDIERLVLKEIIDHGDAKRALRAIHLPLRRFFVEAFKSYIFNRTISKAYEYREELLRPEEDDVCYDKDDNLGRYQNDPQQRLAIPLVGYSYSKKNRFNQDISQILDEEQVSPKDFFVKEMQEVSDEGGFRQAAIQCRDFSISEPYLSFTLSRGSYATILLREIIKPMDPITAGF*