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13_1_40cm_scaffold_7807_26

Organism: 13_1_40CM_Thaumarchaeota_38_12

near complete RP 29 / 55 MC: 2 BSCG 11 / 51 ASCG 32 / 38
Location: comp(20076..20975)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KM45_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 285.0
  • Bit_score: 422
  • Evalue 3.10e-115
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilacea similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 285.0
  • Bit_score: 422
  • Evalue 4.40e-115
transcription initiation factor TFIIB similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 285.0
  • Bit_score: 413
  • Evalue 6.90e-113

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Taxonomy

Candidatus Nitrosoarchaeum limnia → Candidatus Nitrosoarchaeum → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 900
ATGGTAACTGATGGTGTTACCGGAGAAAGATTTTGCGGAGGATGCGGCATTGTTATTACGGAGCGTATTGACAGTTCAGGACCTGAGCTGCGCGCATTTTCAAAAGAGGAATACGATGATAAAGCAAGAACAGGCATGCCAACCTCGCTTGCAGTACATGACATGGGACTTGCGACCATAATTGGCCATGAAAACTCAGACTCGACTGGAAAACCACTGTCCGCTTCAATGAAAAGTACCATAAAACGTCTTAGAACATGGGACGGCCGAAGTCAGGTTCATAGCTCTGTAGACAAAAATTTTAGACAGGCATTTAGTGAACTCAATAGGCTAAAAGACAAGCTTGCACTTTCTGATTCGTTAATCGAAAAAACTGCGTATATTTACAGAAAAGCATTAGACAAAGGTCTTGCCAAAGGCAGGTCAATTCCAGGGCTTATTGCCGCGGCACTATATTTGGCATGCAGGGATACTGGTACGCCTAGGACATTGAGCGAAGTTGCACATCAAATCAATGTAAAAAGAAAAGATGTTTCAAGATGCTACAGGTTACTATTACAAGAACTGGATCTGACAATGCCCGTCTTAGACCCAATCCGATGTATGTCAAGAATAGCAAGCGAGGCTGGTCTTAGTGAAAAAGTAAAACGACAAGCTCTTACAATTCTAGAGGACGCAAACAACATGGAAATTACTGCGGGAAAAGATCCAATGGGACTTGCAGCAGCTGCGTTATATCTTTCATGCACGATAAGCGGAGAAGACACAACACAAAAAGTTATTGCGTTAGCAGCTGGAGTCACGGAAGTTACAATAAGAAACAGGTACAAGGGGCTAAAAGAATCGCTAAATATCATAGTTCCCAATAAAATGAAATTAAAACTCGAAACTAGTTTTTAA
PROTEIN sequence
Length: 300
MVTDGVTGERFCGGCGIVITERIDSSGPELRAFSKEEYDDKARTGMPTSLAVHDMGLATIIGHENSDSTGKPLSASMKSTIKRLRTWDGRSQVHSSVDKNFRQAFSELNRLKDKLALSDSLIEKTAYIYRKALDKGLAKGRSIPGLIAAALYLACRDTGTPRTLSEVAHQINVKRKDVSRCYRLLLQELDLTMPVLDPIRCMSRIASEAGLSEKVKRQALTILEDANNMEITAGKDPMGLAAAALYLSCTISGEDTTQKVIALAAGVTEVTIRNRYKGLKESLNIIVPNKMKLKLETSF*