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13_1_40cm_scaffold_7807

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7807_1
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(2..691)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU4_NITGG
BNR/Asp-box repeats-containing protein Tax=RBG_13_Nitrospirae_43_8_curated
hypothetical protein
13_1_40cm_scaffold_7807_2
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(734..1126)
DNA (393bp) protein (131aa)
hypothetical protein id=14428541 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80648.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_scaffold_7807_3
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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1503..2999
DNA (1497bp) protein (499aa)
Na+/solute symporter n=5 Tax=Sulfolobus islandicus RepID=C3MKS4_SULIL
Na+/solute symporter rbh
Metabolite permease, putative {ECO:0000313|EMBL:AAK42614.1}; TaxID=273057 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus solfataricus (str
13_1_40cm_scaffold_7807_4
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3003..3563)
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5P3_9ARCH
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
13_1_40cm_scaffold_7807_5
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3675..4277)
DNA (603bp) protein (201aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW71331.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_scaffold_7807_6
unknown

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4578..4910
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_scaffold_7807_7
unknown

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5212..5409
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_7807_8
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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6462..6983
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYV0_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA91873.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_scaffold_7807_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7430..7996)
DNA (567bp) protein (189aa)
MEDS: MEthanogen/methylotroph, DcmR Sensory domain
MEDS: MEthanogen/methylotroph, DcmR Sensory domain {ECO:0000313|EMBL:AIF84128.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_scaffold_7807_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8273..8821)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ART3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05367.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_scaffold_7807_11
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9096..9554)
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Photobacterium profundum RepID=Q6LQG5_PHOPR
putative Transcriptional regulator, MarR family protein
Putative Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:AJM92236.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Ca
13_1_40cm_scaffold_7807_12
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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9583..10314
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8G1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81275.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_scaffold_7807_13
unknown

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10298..10840
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_scaffold_7807_14
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10864..11370)
DNA (507bp) protein (169aa)
TPR repeat-containing protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4E7_NITMS
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABX12636.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (str
13_1_40cm_scaffold_7807_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11429..12091)
DNA (663bp) protein (221aa)
phosphoribosyltransferase id=14428407 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
phosphoribosyltransferase Tax=CSP1_1_Thaumarchaeota
phosphoribosyltransferase
13_1_40cm_scaffold_7807_16
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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12198..12827
DNA (630bp) protein (210aa)
carotenoid oxygenase n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI0003462447
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AFY33255.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;
13_1_40cm_scaffold_7807_17
unknown

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comp(12867..13328)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_scaffold_7807_18

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comp(13532..14464)
DNA (933bp) protein (311aa)
transcription initiation factor IIB n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003809AF3
tfb; Transcription initiation factor IIB
Uncharacterized protein {ECO:0000313|EMBL:KKL22441.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_7807_19
unknown

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14687..14887
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_7807_20
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14896..15348)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EBX9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06831.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
transcriptional regulator, ArsR family
13_1_40cm_scaffold_7807_21
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(15580..15738)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:AFS81108.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_scaffold_7807_22
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(15905..16294)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV93_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI06398.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_scaffold_7807_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16487..17062
DNA (576bp) protein (192aa)
psmB3; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL55_NITGG
13_1_40cm_scaffold_7807_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17065..17733
DNA (669bp) protein (223aa)
psmA2; proteasome, subunit alpha (EC:3.4.25.1)
Proteasome, subunit alpha {ECO:0000313|EMBL:AIC16483.1}; EC=3.4.25.1 {ECO:0000313|EMBL:AIC16483.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerace
Proteasome, subunit alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY1_NITGG
13_1_40cm_scaffold_7807_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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17918..20053
DNA (2136bp) protein (712aa)
ATPase AAA Tax=CSP1_1_Thaumarchaeota
ATPase AAA id=14428590 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AAA ATPase
13_1_40cm_scaffold_7807_26
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(20076..20975)
DNA (900bp) protein (300aa)
Transcription initiation factor IIB n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KM45_9ARCH
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilacea
transcription initiation factor TFIIB
13_1_40cm_scaffold_7807_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21213..21944)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60154.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_7807_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22426..23145)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84888.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_scaffold_7807_29
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23313..24437
DNA (1125bp) protein (375aa)
Copper resistance family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG1_NITGG
Copper resistance protein CopC/CopD
Copper resistance protein CopC/CopD {ECO:0000313|EMBL:AIC15672.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
Displaying 29 items

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