ggKbase home page

13_1_40cm_scaffold_15304

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_15304_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..588)
DNA (588bp) protein (196aa)
glycerophosphodiester phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycerophosphodiester phosphodiesterase family protein id=4980422 bin=GWA2_Methylomirabilis_73_35 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerophosphoryl diester phosphodiesterase
13_1_40cm_scaffold_15304_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(589..1488)
DNA (900bp) protein (300aa)
ugpE2; sn-glycerol-3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sn-glycerol-3-phosphate ABC transporter,permease protein id=4238987 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ugpE2; sn-glycerol-3-phosphate transport system permease
13_1_40cm_scaffold_15304_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1488..2369)
DNA (882bp) protein (294aa)
ugpA; protein UgpA; K05814 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sn-glycerol-3-phosphate ABC transporter, permease protein id=4238986 bin=GWC2_Methylomirabilis_70_16 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ugpA; ABC-type sugar transport system, permease components
13_1_40cm_scaffold_15304_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2386..3696)
DNA (1311bp) protein (437aa)
sn-glycerol 3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC-type sugar transport system, periplasmic component id=4644050 bin=GWF2_Methylomirabilis_70_14 species=Grimontia sp. AK16 genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
13_1_40cm_scaffold_15304_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3765..3989)
DNA (225bp) protein (75aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=GWA2_Rokubacteria_73_35_curated
FAD dependent oxidoreductase id=3704571 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 5 items

View Taxonomy