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13_1_40cm_scaffold_20652

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_20652_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..1612
DNA (1611bp) protein (537aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator id=14625658 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mg chelatase subunit ChlI
13_1_40cm_scaffold_20652_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2309..2794)
DNA (486bp) protein (162aa)
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Lytic transglycosylase, catalytic Tax=GWC2_Rokubacteria_70_16_curated
lytic transglycosylase
13_1_40cm_scaffold_20652_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2946..5339)
DNA (2394bp) protein (798aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) id=14625663 bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
13_1_40cm_scaffold_20652_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5367..5753)
DNA (387bp) protein (129aa)
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator id=3544313 bin=GWA2_Methylomirabilis_73_35 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
13_1_40cm_scaffold_20652_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5750..6535)
DNA (786bp) protein (262aa)
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=GWA2_Rokubacteria_73_35_curated
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=3544317 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK
13_1_40cm_scaffold_20652_6
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6720..8504
DNA (1785bp) protein (595aa)
Putative glutamate dehydrogenase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YET4_MOBAS
Putative glutamate dehydrogenase {ECO:0000313|EMBL:EAS48812.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-o
gdhA; NAD-specific glutamate dehydrogenase
13_1_40cm_scaffold_20652_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8559..8945)
DNA (387bp) protein (129aa)
Heat shock protein Hsp20 id=4311462 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heat shock protein Hsp20 Tax=GWA2_Rokubacteria_73_35_curated
Heat shock protein Hsp20
Displaying 7 items

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