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13_1_40cm_scaffold_22789

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_22789_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..496
DNA (495bp) protein (165aa)
proteasome A-type and B-type Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative proteasome A-type and B-type id=2228958 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proteasome A-type and B-type
13_1_40cm_scaffold_22789_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

501..1193
DNA (693bp) protein (231aa)
proteasome A-type and B-type Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative proteasome A-type and B-type id=2228956 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proteasome A-type and B-type
13_1_40cm_scaffold_22789_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1234..2589
DNA (1356bp) protein (452aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] id=14627261 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pafA; proteasome accessory factor PafA (EC:6.3.2.-)
putative proteasome component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_22789_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2788..3249
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627436 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_22789_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3274..3693
DNA (420bp) protein (140aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2228950 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_22789_6
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3717..4304)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI00036F7B9F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW47600.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolily
13_1_40cm_scaffold_22789_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4301..5827)
DNA (1527bp) protein (509aa)
hutH; hypothetical protein; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=GWA2_Rokubacteria_70_23_curated
Histidine ammonia-lyase id=4631976 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine ammonia-lyase
13_1_40cm_scaffold_22789_8
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5800..6891)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WCQ0_BACSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHV97530.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
13_1_40cm_scaffold_22789_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7191..8765)
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=GWC2_Rokubacteria_70_16_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase id=4892444 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_22789_10
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(8862..9635)
DNA (774bp) protein (258aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" sour
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X309_9BACT
13_1_40cm_scaffold_22789_11
unknown

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10084..10455
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_scaffold_22789_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10693..11466
DNA (774bp) protein (258aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=GWA2_Rokubacteria_73_35_curated
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2-dehydro-3-deoxyglucarate aldolase id=2228946 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_22789_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11463..12458
DNA (996bp) protein (332aa)
luciferase family protein Tax=GWA2_Rokubacteria_73_35_curated
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
luciferase-like, subgroup
13_1_40cm_scaffold_22789_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12469..12891
DNA (423bp) protein (141aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=14627264 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
Displaying 14 items

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