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13_1_40cm_scaffold_24911

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_24911_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(3..236)
DNA (234bp) protein (78aa)
acrB; acriflavin resistance protein acrB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Acriflavin resistance protein acrB id=4810595 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acrB; acriflavin resistance protein acrB
13_1_40cm_scaffold_24911_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(270..2165)
DNA (1896bp) protein (632aa)
acrB; acriflavin resistance protein acrB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Acriflavin resistance protein acrB id=4810595 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acrB; acriflavin resistance protein acrB
13_1_40cm_scaffold_24911_3
unknown

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2216..2371
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_scaffold_24911_4
unknown

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2420..2662
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_scaffold_24911_5
unknown

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2939..3154
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_24911_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3347..4567)
DNA (1221bp) protein (407aa)
Putative Acriflavine resistance protein acrA id=4810596 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative acriflavine resistance protein AcrA Tax=GWC2_Rokubacteria_70_16_curated
putative acriflavine resistance protein AcrA
13_1_40cm_scaffold_24911_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4564..4911)
DNA (348bp) protein (116aa)
id=14627642 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_24911_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4911..5579)
DNA (669bp) protein (223aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
medium-chain fatty-acid-CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] id=14625844 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
13_1_40cm_scaffold_24911_9
unknown

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5892..6119
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_24911_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6598..8658
DNA (2061bp) protein (687aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase id=3960006 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
short chain dehydrogenase
13_1_40cm_scaffold_24911_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8655..9581
DNA (927bp) protein (309aa)
Luciferase family protein id=3859443 bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein Tax=GWA2_Rokubacteria_70_23_curated
putative F420-dependent dehydrogenase
13_1_40cm_scaffold_24911_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9593..9802
DNA (210bp) protein (70aa)
putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Ferredoxin reductase id=3960010 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 12 items

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